Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RPL23AP32-201ENST00000395315 459 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 RPS12P24-201ENST00000412619 387 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC004965.1-201ENST00000413033 213 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 TAF13P2-201ENST00000416876 286 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 GPM6BP2-201ENST00000432046 144 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 RPL36AP53-201ENST00000432891 316 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 TPTE2P1-204ENST00000435256 593 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 GPM6BP1-201ENST00000446387 144 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC020550.1-201ENST00000447385 163 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 MTCYBP40-201ENST00000509390 1135 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-351P-201ENST00000516097 100 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 RN7SKP256-201ENST00000517201 314 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC067805.1-201ENST00000559344 470 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC012414.2-201ENST00000559474 187 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 MIR4421-201ENST00000578133 69 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AL645939.4-201ENST00000604495 135 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AL390208.1-201ENST00000605885 644 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC096772.1-201ENST00000609146 564 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC012360.2-201ENST00000609349 391 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC009318.2-201ENST00000610917 651 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 TUG1_2.1-201ENST00000614234 87 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 uc_338.12-201ENST00000616344 181 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 MIR6810-201ENST00000622701 70 ntBASIC0.44□□□□□ -2.34
SPTSSBQ8NFR3 AC092447.10-201ENST00000620607 1652 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC100821.1-201ENST00000523153 2479 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 RNU4-82P-201ENST00000362443 140 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 Y_RNA.234-201ENST00000364409 97 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AL590084.2-201ENST00000401481 382 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC009518.2-201ENST00000418056 731 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 BTF3L4P3-201ENST00000418879 476 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 FTH1P12-201ENST00000432137 551 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 HMGN2P18-201ENST00000450680 270 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC093259.1-201ENST00000509755 300 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 RNU2-53P-201ENST00000516257 147 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC021171.1-201ENST00000603137 706 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC073410.2-201ENST00000603240 332 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 MIR6857-201ENST00000613267 93 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC008759.3-201ENST00000613300 508 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC040896.1-201ENST00000613819 479 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 AC084824.4-201ENST00000620106 731 ntBASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SPTSSBQ8NFR3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-492P-201ENST00000363035 104 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 SNORD114-19-201ENST00000363072 75 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-160P-201ENST00000384591 107 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 MIR23B-201ENST00000384832 97 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 SNORD65C-201ENST00000390962 71 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AL021407.1-201ENST00000404531 386 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 USP9YP33-201ENST00000412220 421 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC114482.1-201ENST00000418010 247 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AL139421.1-201ENST00000423010 169 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 RPL39P6-201ENST00000448289 150 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 RPS27P1-201ENST00000450552 247 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 MTND1P9-201ENST00000453775 944 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 MTND2P6-201ENST00000455337 1030 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AL672167.3-201ENST00000465951 960 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC023194.1-201ENST00000493084 308 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC093852.1-201ENST00000503587 266 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC091860.1-201ENST00000505723 432 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC004817.2-201ENST00000561794 651 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 MIR4666A-201ENST00000580160 79 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 MIR4637-201ENST00000582405 84 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AL353770.2-201ENST00000620024 78 ntBASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 AC019226.1-201ENST00000625666 515 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms