Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC89Q8N998 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC89Q8N998 RNU6-116P-201ENST00000384042 109 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 SNORA18.3-201ENST00000384122 132 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 RNA5SP390-201ENST00000410191 113 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 RNA5SP270-201ENST00000411361 118 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 SNORA43.2-201ENST00000516652 128 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 SNORA48.11-201ENST00000517015 89 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC012414.6-201ENST00000568241 401 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 RPS3AP23-202ENST00000574601 686 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 MIR3126-201ENST00000577443 74 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC064872.1-201ENST00000604823 1072 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC007179.3-201ENST00000604976 235 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.75□□□□□ -1.97
CCDC89Q8N998 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC89Q8N998 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC89Q8N998 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNU6-1287P-201ENST00000362914 107 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 U3.4-201ENST00000363352 213 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNU6-1060P-201ENST00000384664 107 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 MIR186-201ENST00000384988 86 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 SNORD23.1-201ENST00000408212 104 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC087499.2-201ENST00000432861 149 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 HIGD1AP13-201ENST00000509878 289 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC091965.2-201ENST00000512324 613 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC104136.1-201ENST00000512969 394 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNU1-86P-201ENST00000516108 154 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNU2-53P-201ENST00000516257 147 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RNU1-107P-201ENST00000516617 154 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 MIR5195-201ENST00000583555 115 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AL356575.1-201ENST00000603008 283 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 MIR92B-201ENST00000607575 96 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC096577.2-201ENST00000611455 153 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 RMST_4.1-201ENST00000616886 107 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 AC004777.1-201ENST00000624317 287 ntBASIC2.74□□□□□ -1.97
CCDC89Q8N998 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC89Q8N998 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC89Q8N998 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC89Q8N998 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC89Q8N998 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC89Q8N998 RNU6-74P-201ENST00000384235 107 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 RNU6-622P-201ENST00000384272 103 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 MIR454-201ENST00000390180 115 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC074117.2-201ENST00000417130 397 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC008267.5-201ENST00000424928 265 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC027673.1-201ENST00000456245 405 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 RNU7-193P-201ENST00000516723 65 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 BNIP3P6-201ENST00000549284 499 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 MIR5092-201ENST00000583139 88 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC098614.4-201ENST00000607601 462 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC006566.1-201ENST00000608943 513 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 AC011155.2-201ENST00000623202 216 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 SEPT14P19-203ENST00000633205 211 ntBASIC2.73□□□□□ -1.97
CCDC89Q8N998 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC89Q8N998 SNORA62.1-201ENST00000364287 154 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 RNU6-248P-201ENST00000410720 107 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC89Q8N998 PIGFP2-201ENST00000421400 651 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 AIMP1P2-201ENST00000425294 312 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 AC000111.3-201ENST00000433478 193 ntBASIC2.72□□□□□ -1.97
CCDC89Q8N998 HMGB1P31-201ENST00000437242 427 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms