Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
VPS8Q8N3P4 PIGFP2-201ENST00000421400 651 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AL157398.1-201ENST00000452981 186 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AC025465.3-201ENST00000510570 311 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AP003355.1-201ENST00000518956 587 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS8Q8N3P4 CYP2C61P-201ENST00000604072 290 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AC092953.2-201ENST00000608000 699 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 MIR8087-201ENST00000612745 78 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AL359314.1-201ENST00000616913 261 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 OR4G3P-201ENST00000633500 913 ntBASIC0.67□□□□□ -2.3
VPS8Q8N3P4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS8Q8N3P4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
VPS8Q8N3P4 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 BEND7P1-201ENST00000422058 457 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 BPY2DP-201ENST00000422208 265 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC018630.2-202ENST00000422992 927 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AL512637.2-201ENST00000431287 1256 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC245102.2-201ENST00000448956 180 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AL049874.1-201ENST00000489560 388 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC109927.2-201ENST00000506416 303 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 SCARNA15.2-201ENST00000516409 127 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 RNA5SP291-201ENST00000517222 105 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC009268.1-201ENST00000561352 1203 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS8Q8N3P4 AC004808.1-201ENST00000627671 721 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 U6.107-201ENST00000637108 79 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 MTND5P31-201ENST00000419366 1374 ntBASIC0.66□□□□□ -2.3
VPS8Q8N3P4 SNORD51-201ENST00000384320 80 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 RNA5SP511-201ENST00000410487 115 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.65□□□□□ -2.3
VPS8Q8N3P4 BOLA3P3-201ENST00000505182 232 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 SMURF2P1-201ENST00000514992 481 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AC092451.2-201ENST00000538746 658 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AC006199.1-201ENST00000548728 219 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AP005229.2-201ENST00000609980 697 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AL021879.1-201ENST00000611756 288 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 AC099654.5-201ENST00000636479 350 ntBASIC0.65□□□□□ -2.3
VPS8Q8N3P4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
VPS8Q8N3P4 RNU6-386P-201ENST00000362650 107 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 RNU6-1151P-201ENST00000384684 107 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC114737.2-201ENST00000421583 173 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS8Q8N3P4 SUMO1P1-201ENST00000497904 306 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 CENPUP1-201ENST00000526649 1202 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 NACAP3-201ENST00000552100 481 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AL031775.1-201ENST00000607014 887 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 MIR8065-201ENST00000620577 100 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC007490.1-201ENST00000624321 703 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 RNU6-670P-201ENST00000364312 104 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VPS8Q8N3P4 RAB11AP1-201ENST00000442978 646 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC117525.1-201ENST00000515228 503 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC136628.3-201ENST00000521868 290 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AL109933.3-201ENST00000619095 188 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 AC009318.4-201ENST00000620496 486 ntBASIC0.64□□□□□ -2.31
VPS8Q8N3P4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 RNU6-439P-201ENST00000384188 106 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 MIR514A1-201ENST00000385133 98 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS8Q8N3P4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS8Q8N3P4 ADAM3B-201ENST00000569937 840 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 AC017104.5-201ENST00000637647 639 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS8Q8N3P4 AC110491.1-201ENST00000562191 2010 ntBASIC0.63□□□□□ -2.31
VPS8Q8N3P4 Z75746.1-201ENST00000440243 2080 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 RNU6-492P-201ENST00000363035 104 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 SNORD1A-201ENST00000364968 72 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 MIR135A2-201ENST00000384854 100 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 MIR95-201ENST00000385072 81 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS8Q8N3P4 SNRPEP7-201ENST00000438350 220 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS8Q8N3P4 AC098831.1-201ENST00000440661 216 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.62□□□□□ -2.31
VPS8Q8N3P4 RNU4-57P-201ENST00000515980 135 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
VPS8Q8N3P4 AC124293.1-201ENST00000530034 493 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS8Q8N3P4 CR383656.7-201ENST00000548164 174 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 MIR8063-201ENST00000621930 81 ntBASIC0.62□□□□□ -2.31
VPS8Q8N3P4 RNA5SP257-201ENST00000363023 116 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 RNU2-47P-201ENST00000410649 186 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms