Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC127455.1-201ENST00000565496 145 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 OR7E18P-201ENST00000592589 702 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 SUMO2P15-201ENST00000604285 278 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 AL359198.2-201ENST00000611836 194 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 MIR6129-201ENST00000616087 109 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 MIR3674-201ENST00000636576 68 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 TLK1P1-201ENST00000456760 2440 ntBASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC116Q8IYX3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RNU6-324P-201ENST00000363957 106 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RNU6-801P-201ENST00000364087 105 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RNU6-140P-201ENST00000384566 108 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RNU6-476P-201ENST00000384726 107 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 MTATP6P7-201ENST00000453315 681 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RPS23P7-201ENST00000466210 444 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RAC1P5-201ENST00000512182 576 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RNU1-103P-201ENST00000516502 125 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 RN7SKP260-201ENST00000516907 149 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 MIR4679-2-201ENST00000578358 77 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 AC006380.1-201ENST00000603598 186 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 AC013791.1-201ENST00000616619 62 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 BX005214.3-202ENST00000619809 325 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 AL133243.3-201ENST00000617415 3004 ntBASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC116Q8IYX3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC068700.1-201ENST00000565862 3754 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC092268.1-201ENST00000342691 405 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 SNORA8.3-201ENST00000384679 139 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MIR626-201ENST00000385032 94 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AL133270.1-201ENST00000402635 279 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 SNORA77-201ENST00000408716 125 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 RNA5SP475-201ENST00000410568 110 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC006461.1-201ENST00000412637 326 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC096649.2-201ENST00000416186 393 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 BX510359.3-201ENST00000422168 306 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC104333.2-201ENST00000422630 192 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC078809.1-201ENST00000427601 140 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AL450023.3-201ENST00000440592 271 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 RN7SL244P-201ENST00000493405 297 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 RNU6-436P-201ENST00000516171 114 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 RN7SKP276-201ENST00000516242 268 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 CR383656.8-201ENST00000549046 145 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MIR4700-201ENST00000578311 74 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MIR3613-201ENST00000579844 87 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 LARP7P3-201ENST00000579888 337 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 RNA5SP108-201ENST00000605921 117 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 AC211433.2-201ENST00000608433 387 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC116Q8IYX3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNU6-270P-201ENST00000364131 105 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 Y_RNA.293-201ENST00000364908 93 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNA5SP455-201ENST00000365190 119 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNU1-100P-201ENST00000365255 165 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 SNORA70.10-201ENST00000384515 134 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 MIR549A-201ENST00000385268 96 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNU6-460P-201ENST00000391158 108 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 SNORA26.5-201ENST00000391215 123 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC007738.1-201ENST00000413892 348 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC012306.1-201ENST00000423267 114 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC244670.1-201ENST00000436879 112 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AL691482.1-201ENST00000453255 87 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms