Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RANP3-201ENST00000530970 276 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 ARL2BPP2-201ENST00000550907 489 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC007375.1-201ENST00000554513 578 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RPS3AP4-201ENST00000555161 764 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC007363.1-201ENST00000604736 620 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AP000860.1-201ENST00000605250 559 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RNY4P16-201ENST00000364768 94 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RNU6-658P-201ENST00000384606 106 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RNU2-36P-201ENST00000410361 191 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RNU2-62P-201ENST00000410868 191 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 HIGD1AP15-201ENST00000416198 280 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RAC1P6-201ENST00000423911 575 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AL353777.1-201ENST00000425552 326 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 PTGES3P4-201ENST00000426243 356 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 MTND4P25-201ENST00000441039 533 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC118469.1-201ENST00000442943 488 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 snoU13.23-201ENST00000458863 104 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 SNORA3.4-201ENST00000515969 96 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 MTND4LP18-201ENST00000526864 291 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 CBX3P7-201ENST00000532876 502 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC008751.2-201ENST00000597885 980 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AL358072.1-201ENST00000604156 575 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 uc_338.12-201ENST00000616344 181 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AC024581.2-201ENST00000619986 252 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 AL589994.2-201ENST00000621124 579 ntBASIC1.87□□□□□ -2.11
CDKL3Q8IVW4 RNU6-288P-201ENST00000363690 104 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 RNU6-19P-201ENST00000384718 107 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MIR1289-2-201ENST00000408360 111 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL592045.1-201ENST00000429867 352 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 HMGN2P3-201ENST00000433603 273 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 HMGN2P5-201ENST00000436882 273 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MTCYBP39-201ENST00000437562 491 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL008629.1-201ENST00000438615 184 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC068587.2-201ENST00000478386 781 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 RNU6-703P-201ENST00000516946 107 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC022616.6-201ENST00000520479 119 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC107934.1-201ENST00000522215 217 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 ZNF519P3-201ENST00000557158 1032 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC091489.2-201ENST00000566263 604 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC002400.1-201ENST00000569310 726 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MIR3126-201ENST00000577443 74 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MIR4769-201ENST00000584126 77 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC005261.5-201ENST00000596280 355 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC073544.2-201ENST00000601155 540 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC022022.2-201ENST00000602989 360 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.6-201ENST00000603753 252 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 MTCYBP22-201ENST00000603788 447 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.11-201ENST00000604059 253 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC008162.1-201ENST00000604718 254 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.1-201ENST00000604752 252 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.5-201ENST00000605253 252 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.12-201ENST00000605291 253 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.8-201ENST00000605353 252 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC121334.2-201ENST00000605387 271 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL670379.7-201ENST00000605823 252 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AC006338.1-201ENST00000618453 749 ntBASIC1.86□□□□□ -2.11
CDKL3Q8IVW4 AL445523.1-201ENST00000451184 1362 ntBASIC1.85□□□□□ -2.11
CDKL3Q8IVW4 AC092104.1-201ENST00000497346 1441 ntBASIC1.85□□□□□ -2.11
CDKL3Q8IVW4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDKL3Q8IVW4 NACAP2-201ENST00000318548 624 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms