Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC117522.2-201ENST00000510049 657 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 MTCO2P4-201ENST00000517968 247 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC008536.2-201ENST00000607284 349 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC069294.1-201ENST00000608397 350 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC099842.1-201ENST00000619919 596 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
PRPF39Q86UA1 AC135776.4-201ENST00000624300 1904 ntBASIC2.8□□□□□ -1.96
PRPF39Q86UA1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 SNORD14B-201ENST00000364533 90 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 SNORA75-201ENST00000384158 137 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 RPS4XP8-201ENST00000402039 771 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 FTH1P15-201ENST00000406984 280 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL109933.2-201ENST00000452651 260 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL162395.1-201ENST00000457882 422 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 RNU7-26P-201ENST00000458980 63 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 MRPL42P6-201ENST00000486397 371 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC011005.2-201ENST00000487324 359 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 MTAPP1-201ENST00000489154 819 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC090096.1-201ENST00000489168 390 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC091834.1-201ENST00000614543 472 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC011155.2-201ENST00000623202 216 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 CR381653.2-201ENST00000624041 768 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 AC009161.2-201ENST00000624626 138 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
PRPF39Q86UA1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF39Q86UA1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 Z75746.1-201ENST00000440243 2080 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU4-48P-201ENST00000365559 182 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU6-220P-201ENST00000390919 107 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU6-550P-201ENST00000391057 101 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AL360182.1-201ENST00000397433 468 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU2-9P-201ENST00000410194 145 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 PGBD4P6-201ENST00000421501 610 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RPL30P4-201ENST00000429309 333 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 MICF-203ENST00000432679 129 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC108938.1-201ENST00000451204 136 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC112771.1-201ENST00000463581 102 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC079382.1-201ENST00000493346 557 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 SNORD27.1-201ENST00000516319 72 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 RNU6-826P-201ENST00000516827 104 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC109329.2-201ENST00000519658 482 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AP004607.1-201ENST00000524456 203 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC010186.2-204ENST00000537668 439 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC105245.1-201ENST00000581934 244 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
PRPF39Q86UA1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.78□□□□□ -1.96
PRPF39Q86UA1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.97
PRPF39Q86UA1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms