Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR34A-201ENST00000385130 110 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDB1Q86U70 RPL21P75-201ENST00000396599 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RPL21P28-201ENST00000401418 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AL592114.1-201ENST00000403842 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AL669831.1-202ENST00000428504 417 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 GTF2IP13-201ENST00000438487 386 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AL135938.1-201ENST00000443141 297 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AC092001.1-201ENST00000453012 261 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.76□□□□□ -1.97
LDB1Q86U70 SCARNA18-201ENST00000459004 134 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RPL21P39-201ENST00000463605 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RPL21P93-201ENST00000480465 489 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC087190.1-201ENST00000484462 480 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC093591.1-201ENST00000491435 481 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RPL21P16-201ENST00000495531 483 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 MTCO3P9-201ENST00000506989 781 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.76□□□□□ -1.97
LDB1Q86U70 MTND3P25-201ENST00000509243 135 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 HIGD1AP13-201ENST00000509878 289 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC074344.1-201ENST00000512823 224 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-581P-201ENST00000516214 105 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 MIR892C-201ENST00000516410 77 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.76□□□□□ -1.97
LDB1Q86U70 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC027807.1-201ENST00000559921 996 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 HMGB1P33-201ENST00000563485 527 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AC106782.4-201ENST00000568264 210 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AC011471.1-201ENST00000585766 187 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AL391813.1-201ENST00000603098 260 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 AF250324.2-201ENST00000608299 610 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LDB1Q86U70 AC096644.4-201ENST00000563417 2912 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LDB1Q86U70 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LDB1Q86U70 AL354685.2-201ENST00000448218 1447 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
LDB1Q86U70 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LDB1Q86U70 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 Y_RNA.516-201ENST00000384541 124 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 SNORD70.1-201ENST00000391007 85 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 RPL17P50-201ENST00000396131 546 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB1Q86U70 RPL7P10-201ENST00000417407 739 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 RPL7P37-201ENST00000425095 738 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC116655.1-201ENST00000508324 901 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 OR5AQ1P-201ENST00000527596 927 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB1Q86U70 ZNF519P2-201ENST00000557032 169 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC025678.1-201ENST00000567861 338 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LDB1Q86U70 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AC068790.6-201ENST00000602558 258 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AC091152.3-201ENST00000604227 325 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 RMST_4.1-201ENST00000616886 107 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 AL137790.1-201ENST00000634283 177 ntBASIC2.75□□□□□ -1.97
LDB1Q86U70 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB1Q86U70 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LDB1Q86U70 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB1Q86U70 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDB1Q86U70 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB1Q86U70 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU6-384P-201ENST00000364900 104 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU6-19P-201ENST00000384718 107 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AL512633.1-201ENST00000399931 655 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 NDUFB4P4-201ENST00000404822 243 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AL590002.1-201ENST00000406554 418 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 U3.37-201ENST00000408528 213 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU6-607P-201ENST00000411283 108 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC016831.2-201ENST00000417179 352 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB1Q86U70 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB1Q86U70 PTGES3P4-201ENST00000426243 356 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB1Q86U70 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB1Q86U70 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB1Q86U70 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU7-180P-201ENST00000459240 63 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC011005.2-201ENST00000487324 359 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms