Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AL118520.1-201ENST00000450770 291 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 RPS29P15-201ENST00000458329 171 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 RNU7-182P-201ENST00000459009 62 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 RNU7-180P-201ENST00000459240 63 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 MIR2053-201ENST00000459295 91 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.05□□□□□ -1.92
USP43Q70EL4 COX7A2P2-201ENST00000505291 250 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC110794.1-201ENST00000505816 425 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AP000857.1-201ENST00000532151 543 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC128657.1-201ENST00000549459 145 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 AC113195.1-201ENST00000579952 141 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 COX6CP3-201ENST00000580869 223 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC062037.2-201ENST00000610137 73 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 MIR7851-201ENST00000610611 160 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AF117829.1-206ENST00000621883 3802 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.05□□□□□ -1.92
USP43Q70EL4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP43Q70EL4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP43Q70EL4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
USP43Q70EL4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
USP43Q70EL4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
USP43Q70EL4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.04□□□□□ -1.92
USP43Q70EL4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 RNY1P14-201ENST00000384426 108 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 Y_RNA.496-201ENST00000384444 101 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RNU6-1109P-201ENST00000391187 107 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RNU2-29P-201ENST00000410423 189 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 Z92545.1-201ENST00000411782 234 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RPL37P10-201ENST00000412884 288 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC080125.1-201ENST00000414888 684 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC016696.1-201ENST00000446949 318 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC020550.1-201ENST00000447385 163 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RN7SL807P-201ENST00000470923 297 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RPL7P43-201ENST00000478876 753 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC083904.1-201ENST00000487828 231 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 VN1R104P-201ENST00000505115 1009 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC116562.3-201ENST00000506136 177 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RN7SKP24-201ENST00000515888 284 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 SNORA25.10-201ENST00000515926 124 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RNU6-635P-201ENST00000516651 102 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RNU6-566P-201ENST00000516790 107 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC007991.1-201ENST00000522680 631 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC068587.5-201ENST00000528506 175 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 MTCO3P23-201ENST00000561363 289 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.04□□□□□ -1.92
USP43Q70EL4 AL022099.1-201ENST00000604551 712 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 AL590099.1-201ENST00000615276 138 ntBASIC3.04□□□□□ -1.92
USP43Q70EL4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP43Q70EL4 ZNF734P-201ENST00000419494 1534 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 SNORA62.1-201ENST00000364287 154 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNA5SP51-201ENST00000364750 119 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNU4-66P-201ENST00000365199 138 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 Y_RNA.447-201ENST00000384184 113 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNU6-339P-201ENST00000384310 107 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 Y_RNA.512-201ENST00000384518 102 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNVU1-14-201ENST00000384770 164 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms