Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-778P-201ENST00000363269 103 ntBASIC1□□□□□ -2.25
USP54Q70EL1 MTCO2P31-201ENST00000402702 684 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AL133264.1-201ENST00000407157 562 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1□□□□□ -2.25
USP54Q70EL1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1□□□□□ -2.25
USP54Q70EL1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1□□□□□ -2.25
USP54Q70EL1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1□□□□□ -2.25
USP54Q70EL1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1□□□□□ -2.25
USP54Q70EL1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1□□□□□ -2.25
USP54Q70EL1 AC004805.2-201ENST00000605382 482 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AC022513.1-201ENST00000624512 117 ntBASIC1□□□□□ -2.25
USP54Q70EL1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1□□□□□ -2.25
USP54Q70EL1 MIR518A2-201ENST00000384966 87 ntBASIC1□□□□□ -2.25
USP54Q70EL1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1□□□□□ -2.25
USP54Q70EL1 OR9R1P-201ENST00000412200 877 ntBASIC1□□□□□ -2.25
USP54Q70EL1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1□□□□□ -2.25
USP54Q70EL1 UBE2V2P3-201ENST00000433562 437 ntBASIC1□□□□□ -2.25
USP54Q70EL1 VN1R10P-201ENST00000447106 875 ntBASIC1□□□□□ -2.25
USP54Q70EL1 MTND2P6-201ENST00000455337 1030 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1□□□□□ -2.25
USP54Q70EL1 AC010460.2-201ENST00000509054 677 ntBASIC1□□□□□ -2.25
USP54Q70EL1 RNA5SP135-201ENST00000517019 125 ntBASIC1□□□□□ -2.25
USP54Q70EL1 RNA5SP290-201ENST00000517133 127 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AC023824.3-201ENST00000569003 562 ntBASIC1□□□□□ -2.25
USP54Q70EL1 LARP7P2-201ENST00000575306 125 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AC012213.3-201ENST00000577199 777 ntBASIC1□□□□□ -2.25
USP54Q70EL1 MIR3167-201ENST00000579623 85 ntBASIC1□□□□□ -2.25
USP54Q70EL1 SNRPGP17-201ENST00000603780 214 ntBASIC1□□□□□ -2.25
USP54Q70EL1 U1.36-201ENST00000620684 176 ntBASIC1□□□□□ -2.25
USP54Q70EL1 AC002550.2-201ENST00000621246 394 ntBASIC1□□□□□ -2.25
USP54Q70EL1 Z75746.1-201ENST00000440243 2080 ntBASIC1□□□□□ -2.25
USP54Q70EL1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.99□□□□□ -2.25
USP54Q70EL1 MTCO3P1-205ENST00000422088 832 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AL590365.1-201ENST00000450788 243 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AC006512.1-201ENST00000468816 291 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.99□□□□□ -2.25
USP54Q70EL1 AC022202.1-201ENST00000613515 211 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 AL359314.1-201ENST00000616913 261 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 AC132825.7-201ENST00000638744 335 ntBASIC0.99□□□□□ -2.25
USP54Q70EL1 RNU6-1078P-201ENST00000364522 103 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 RNU6-939P-201ENST00000384634 107 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.98□□□□□ -2.25
USP54Q70EL1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.98□□□□□ -2.25
USP54Q70EL1 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 MTCYBP32-201ENST00000427945 1084 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.98□□□□□ -2.25
USP54Q70EL1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.98□□□□□ -2.25
USP54Q70EL1 RNA5SP57-201ENST00000459463 123 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 RNA5SP476-201ENST00000516613 103 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.98□□□□□ -2.25
USP54Q70EL1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.98□□□□□ -2.25
USP54Q70EL1 RRN3P3-201ENST00000549207 578 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC012414.2-201ENST00000559474 187 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC133485.1-201ENST00000567176 124 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC004853.1-201ENST00000604902 698 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC016925.2-201ENST00000605108 242 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC011939.3-201ENST00000613686 466 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 AC107075.1-201ENST00000613695 314 ntBASIC0.98□□□□□ -2.25
USP54Q70EL1 CBX3P1-201ENST00000325243 554 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 Y_RNA.245-201ENST00000364493 95 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 RNU6-754P-201ENST00000391166 107 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 MTATP6P27-201ENST00000416987 621 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 ELOCP14-201ENST00000428070 331 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.97□□□□□ -2.25
USP54Q70EL1 ELOCP7-201ENST00000439968 331 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 JTBP1-201ENST00000441314 247 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.97□□□□□ -2.25
USP54Q70EL1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC112198.4-201ENST00000515450 351 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC010900.2-201ENST00000604508 210 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 MIR8087-201ENST00000612745 78 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
USP54Q70EL1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
USP54Q70EL1 RNU2-33P-201ENST00000410344 192 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 RN7SKP61-201ENST00000410642 295 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.97□□□□□ -2.25
USP54Q70EL1 MTND5P8-201ENST00000449817 1083 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.97□□□□□ -2.25
USP54Q70EL1 SNORA4.4-201ENST00000515921 135 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 RNU5B-3P-201ENST00000516601 115 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AL359212.1-201ENST00000556608 614 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AC233702.2-202ENST00000562547 291 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.97□□□□□ -2.25
USP54Q70EL1 AC005786.1-201ENST00000588553 154 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AC021646.1-201ENST00000605469 484 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AC103810.8-201ENST00000607347 118 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 AP005229.2-201ENST00000609980 697 ntBASIC0.97□□□□□ -2.25
USP54Q70EL1 DUSP12P1-201ENST00000612874 516 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms