Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC092474.3-201ENST00000603022 568 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 LARP7P1-201ENST00000605576 316 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AC113194.1-201ENST00000606037 500 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS13CQ709C8 RNU6-335P-201ENST00000364563 113 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 AP1S2P1-201ENST00000457344 379 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 RPL21P103-201ENST00000479921 488 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 SNORA36.1-201ENST00000363424 132 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 RNU6-1263P-201ENST00000384601 106 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 MIR608-201ENST00000384820 100 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 MIR635-201ENST00000384830 98 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 MTCO2P8-201ENST00000412213 658 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 AL606495.1-201ENST00000422100 813 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 SNRPFP2-201ENST00000440710 251 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 MTND4P19-201ENST00000446659 478 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 HMGB1P36-201ENST00000487709 576 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 AC093788.1-201ENST00000609356 927 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS13CQ709C8 AC010631.1-201ENST00000474150 156 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
VPS13CQ709C8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC-0.08□□□□□ -2.42
VPS13CQ709C8 BNIP3P25-201ENST00000596023 559 ntBASIC-0.08□□□□□ -2.42
VPS13CQ709C8 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 PNRC2P1-201ENST00000423940 420 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 MTND4LP13-201ENST00000425022 298 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 MTATP6P23-201ENST00000440153 476 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AC093677.1-201ENST00000514414 678 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 EIF1P4-201ENST00000572664 335 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AC090517.2-201ENST00000614966 680 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AC244098.2-201ENST00000422068 99 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 RPS27AP8-201ENST00000452665 445 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AC112487.2-201ENST00000637950 304 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 RNU4-48P-201ENST00000365559 182 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 RNU6-110P-201ENST00000384508 104 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 RPL7P30-201ENST00000420888 709 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.09□□□□□ -2.42
VPS13CQ709C8 AL121839.1-201ENST00000556233 1185 ntBASIC-0.09□□□□□ -2.42
VPS13CQ709C8 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 MIR153-1-201ENST00000384914 90 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC090616.5-202ENST00000582111 297 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC098614.4-201ENST00000607601 462 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 MTATP6P9-201ENST00000515039 680 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC007751.1-201ENST00000529260 376 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 HMGB1P29-201ENST00000505659 499 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AL359212.1-201ENST00000556608 614 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 AL353149.1-201ENST00000610667 244 ntBASIC-0.1□□□□□ -2.43
VPS13CQ709C8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 SNORD44.1-201ENST00000363202 61 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 RNA5SP222-201ENST00000411039 105 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC009310.1-201ENST00000414414 451 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC091304.9-201ENST00000612091 226 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 uc_338.34-201ENST00000617467 174 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 PTGES3P4-201ENST00000426243 356 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 RAP1BP2-201ENST00000478270 544 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 RNU4-54P-201ENST00000516428 129 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 OR1M4P-201ENST00000589199 287 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AL162730.1-201ENST00000605734 292 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AL512506.2-201ENST00000624472 458 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 RNU6-225P-201ENST00000384613 103 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 SNORA16.2-201ENST00000390991 127 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 RNU1-119P-201ENST00000391122 165 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC108740.1-201ENST00000498629 225 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 XIAPP1-201ENST00000603162 600 ntBASIC-0.11□□□□□ -2.43
VPS13CQ709C8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC-0.12□□□□□ -2.43
VPS13CQ709C8 MIR6134-201ENST00000617606 109 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 RNU4-45P-201ENST00000365469 141 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AC002350.1-201ENST00000490759 375 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AC010469.2-201ENST00000496412 480 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 MTCYBP41-201ENST00000528913 1123 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AP001596.2-201ENST00000608410 312 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AC025588.4-201ENST00000615802 908 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AL132822.1-201ENST00000617063 513 ntBASIC-0.12□□□□□ -2.43
VPS13CQ709C8 AC092192.1-201ENST00000633154 1018 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms