Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AL133412.1-201ENST00000380194 2992 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 RNA5SP119-201ENST00000362715 117 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.401-201ENST00000383965 117 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 SNORA5A-201ENST00000384111 134 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.452-201ENST00000384202 108 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.527-201ENST00000384573 102 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 MIR483-201ENST00000385070 76 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AL138885.1-201ENST00000405921 675 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 SNORA3.3-201ENST00000408712 125 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 PGBD4P6-201ENST00000421501 610 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AL139247.1-201ENST00000422768 325 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AC007560.1-201ENST00000426912 237 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 RPS3AP12-201ENST00000443616 753 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AL031274.1-201ENST00000450334 232 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AC139453.3-201ENST00000493276 369 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 RPL31P61-201ENST00000496160 376 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AP000889.1-201ENST00000530968 660 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 ZNF192P1-203ENST00000565888 810 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 MIR3690-201ENST00000580266 75 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AC009314.1-201ENST00000603871 304 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AL161629.2-201ENST00000615347 275 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 AL391261.4-201ENST00000616012 481 ntBASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RUFY4Q6ZNE9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC007685.1-201ENST00000329806 452 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-827P-201ENST00000365553 106 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.605-201ENST00000410577 105 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC096644.2-201ENST00000429278 159 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AL159987.2-201ENST00000432754 307 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC083863.1-201ENST00000438811 231 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-120P-201ENST00000516077 103 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 RNU4-77P-201ENST00000516692 156 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-703P-201ENST00000516946 107 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 RNU7-4P-201ENST00000516961 62 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC026403.1-201ENST00000518938 295 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC016727.2-201ENST00000603988 621 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC104695.3-201ENST00000604052 296 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC005014.2-201ENST00000607795 599 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 MIR8076-201ENST00000611401 83 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC010205.1-201ENST00000616668 449 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC012314.7-201ENST00000619693 93 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 SCARNA4-202ENST00000625402 129 ntBASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RUFY4Q6ZNE9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 RNY1P16-201ENST00000363063 111 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.176-201ENST00000363815 109 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.380-201ENST00000365663 111 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-140P-201ENST00000384566 108 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.557-201ENST00000384680 107 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.645-201ENST00000391229 102 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 RPL21P17-201ENST00000397467 475 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 HMGB3P2-201ENST00000411913 584 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC112492.4-201ENST00000456549 352 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC022616.4-201ENST00000522985 181 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 OR5D17P-201ENST00000531492 978 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC008269.2-201ENST00000561915 1105 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC113195.1-201ENST00000579952 141 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 MIR4503-201ENST00000582187 83 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC138305.3-201ENST00000624988 240 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AL034408.1-202ENST00000636088 415 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AL773545.4-201ENST00000637262 310 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AL513478.4-201ENST00000641636 310 ntBASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms