Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 RNA5SP39-201ENST00000411245 120 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AL096701.2-201ENST00000416920 238 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC007098.1-201ENST00000420122 367 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 CYCSP35-201ENST00000451978 304 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC010285.1-201ENST00000470580 392 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-408P-201ENST00000515910 100 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC084851.1-201ENST00000529105 249 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 HMGB1P50-201ENST00000605814 607 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 U8.8-201ENST00000365399 135 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-700P-201ENST00000391043 107 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AC092573.2-201ENST00000434546 243 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AC083863.1-201ENST00000438811 231 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 HSPE1P20-201ENST00000538133 289 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 RPS29P30-201ENST00000600975 111 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AC004805.2-201ENST00000605382 482 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AC078938.1-201ENST00000620993 318 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AL360181.4-201ENST00000621752 134 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 AC138627.2-201ENST00000624202 601 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 MIR3651-201ENST00000630427 90 ntBASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40BQ6NWY9 ZNF299P-201ENST00000406845 1804 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.276-201ENST00000364732 109 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 SAR1AP2-201ENST00000392696 594 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 MIR1251-201ENST00000408552 70 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 PGBD4P6-201ENST00000421501 610 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 BX510359.1-201ENST00000456973 237 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 RN7SL271P-201ENST00000487601 295 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 RPS26P15-201ENST00000488067 348 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AL359273.1-201ENST00000510918 627 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AC022695.1-201ENST00000522089 237 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AL158827.2-201ENST00000602494 330 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AL390123.1-201ENST00000603216 237 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AC006023.2-201ENST00000609916 167 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 AL691447.3-201ENST00000635020 330 ntBASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF40BQ6NWY9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC233263.6-201ENST00000631132 1963 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 OR56A5-201ENST00000340110 738 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RNA5SP267-201ENST00000364893 126 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.350-201ENST00000365409 98 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-827P-201ENST00000365553 106 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 MIR490-201ENST00000384865 128 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 MTCO3P19-201ENST00000415864 321 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC007919.1-201ENST00000429380 217 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL356867.1-201ENST00000429623 299 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC087650.1-201ENST00000431445 468 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL583843.1-201ENST00000456070 346 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RPS20P22-201ENST00000473700 357 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL160314.1-201ENST00000490836 438 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 SNORA25.11-201ENST00000515935 105 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-397P-201ENST00000516226 104 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RNA5SP290-201ENST00000517133 127 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms