Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.21□□□□□ -2.06
ATL3Q6DD88 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.21□□□□□ -2.06
ATL3Q6DD88 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.21□□□□□ -2.06
ATL3Q6DD88 AL138976.2-201ENST00000563989 694 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 MIR3167-201ENST00000579623 85 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 AL359999.1-201ENST00000604513 294 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 AP002360.4-201ENST00000606980 481 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 AC087683.2-201ENST00000611384 326 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 AC091304.9-201ENST00000612091 226 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 AL589994.2-201ENST00000621124 579 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
ATL3Q6DD88 Z99571.1-201ENST00000636677 394 ntBASIC2.21□□□□□ -2.06
ATL3Q6DD88 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
ATL3Q6DD88 MIR147B-201ENST00000390185 80 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 RN7SKP32-201ENST00000410167 303 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 RNA5SP425-201ENST00000410336 112 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC003685.2-201ENST00000422795 395 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 MTND5P25-201ENST00000430499 799 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 ART2BP-201ENST00000453501 499 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AL121769.1-201ENST00000469473 401 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 MTAPP1-201ENST00000489154 819 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC007182.2-201ENST00000489251 402 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC011979.2-201ENST00000527568 352 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 OR5B19P-201ENST00000531766 928 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC105245.1-201ENST00000581934 244 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC112191.3-201ENST00000604371 277 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC092354.1-201ENST00000606057 376 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC022893.3-201ENST00000607665 437 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AL451064.1-201ENST00000607718 471 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC130324.3-201ENST00000614165 542 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 AC024581.2-201ENST00000619986 252 ntBASIC2.2□□□□□ -2.06
ATL3Q6DD88 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ATL3Q6DD88 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNU4-82P-201ENST00000362443 140 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 SNORD56.2-201ENST00000363242 71 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNU6-748P-201ENST00000384648 107 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC004383.1-201ENST00000438135 289 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 UBE2D3P4-201ENST00000441973 436 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 USP9YP12-201ENST00000450481 570 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AL139824.2-201ENST00000458731 1095 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 MTCO2P29-201ENST00000465212 189 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC107393.1-201ENST00000512403 346 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNU6-914P-201ENST00000516749 109 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 RPL21P5-201ENST00000554662 472 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AL133241.1-201ENST00000556832 487 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 ANP32BP3-201ENST00000559213 706 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 MIR3915-201ENST00000578518 97 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC073544.2-201ENST00000601155 540 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 APOOP1-201ENST00000604695 592 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 MIR6134-201ENST00000617606 109 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 U4atac.1-201ENST00000618345 95 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC244517.12-201ENST00000623581 663 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 PISRT1-201ENST00000626175 531 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 AC025048.6-202ENST00000627667 438 ntBASIC2.19□□□□□ -2.06
ATL3Q6DD88 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.19□□□□□ -2.06
ATL3Q6DD88 RNU5E-1-201ENST00000362477 120 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 SNORA67.3-201ENST00000384366 140 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 MIR218-1-201ENST00000384999 110 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 MIR518D-201ENST00000385014 87 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC092809.3-201ENST00000415453 231 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC114491.1-201ENST00000416095 246 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 CYCSP48-201ENST00000417124 323 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 DPH3P2-201ENST00000422618 250 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 EIF4EP4-201ENST00000424916 578 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 RPL30P4-201ENST00000429309 333 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 Z98742.2-201ENST00000431564 187 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 MYL8P-204ENST00000431574 518 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 RPL7P34-201ENST00000433316 712 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AL451074.3-201ENST00000437709 472 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 RAP1BP2-201ENST00000478270 544 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC008413.1-201ENST00000511864 177 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC118465.1-201ENST00000513820 1271 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms