Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AL645568.3-201ENST00000433683 316 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 MRPL50P4-201ENST00000446432 475 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC013470.1-201ENST00000453438 462 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 RNU6-1037P-201ENST00000459571 107 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 MTCYBP40-201ENST00000509390 1135 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC096745.1-201ENST00000509945 370 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC010186.2-204ENST00000537668 439 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC007224.1-201ENST00000564410 144 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC009163.5-201ENST00000575421 637 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 LARP7P1-201ENST00000605576 316 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC064836.2-201ENST00000609491 462 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 AC104237.2-201ENST00000612456 443 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 ZNF519P1-201ENST00000449011 1626 ntBASIC3.37□□□□□ -1.87
RNF220Q5VTB9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF220Q5VTB9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.263-201ENST00000364659 114 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 RNU6-827P-201ENST00000365553 106 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 MIR30B-201ENST00000384850 88 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AL117339.3-201ENST00000418733 162 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 RPL7P37-201ENST00000425095 738 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC004975.1-201ENST00000428733 208 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 RPS15AP10-201ENST00000432472 382 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AL358232.1-201ENST00000448030 501 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 MTND1P11-201ENST00000456661 876 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC108043.1-201ENST00000512696 574 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC104576.1-201ENST00000524225 88 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 MIR4790-201ENST00000577799 79 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AL391813.1-201ENST00000603098 260 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 AC008264.2-201ENST00000610193 3731 ntBASIC3.36□□□□□ -1.87
RNF220Q5VTB9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RNF220Q5VTB9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RNU6-527P-201ENST00000363425 104 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.184-201ENST00000363884 108 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RNU6-748P-201ENST00000384648 107 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL360182.1-201ENST00000397433 468 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL139247.1-201ENST00000422768 325 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 SNRPEP8-201ENST00000442866 260 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC012308.1-201ENST00000451232 178 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 NUTF2P7-201ENST00000453086 375 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC130509.1-201ENST00000464158 433 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC107626.1-201ENST00000471084 183 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 MED28P2-201ENST00000475771 317 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RPL23AP49-201ENST00000492925 468 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AK3P2-201ENST00000507976 429 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RAC1P5-201ENST00000512182 576 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RPL39P5-202ENST00000512505 151 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.691-201ENST00000516611 103 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC011611.1-201ENST00000552179 197 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL670379.10-201ENST00000604330 253 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL670379.9-201ENST00000605428 253 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL121917.1-203ENST00000605534 577 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AL355365.1-201ENST00000616480 294 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 UCA1.1-201ENST00000620952 75 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 AC099654.5-201ENST00000636479 350 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 MIR3529-201ENST00000637713 78 ntBASIC3.35□□□□□ -1.87
RNF220Q5VTB9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms