Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 CBX3P4-201ENST00000538909 354 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 MIR4325-201ENST00000583049 90 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 AL049781.1-201ENST00000623195 3585 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 AC004925.1-201ENST00000624256 2706 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 Z95331.1-201ENST00000623075 23112 ntBASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.71□□□□□ -1.66
COL13A1Q5TAT6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 RNU6-774P-201ENST00000363238 107 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 Y_RNA.143-201ENST00000363520 106 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 Y_RNA.199-201ENST00000364014 102 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 SNORD78.2-201ENST00000391076 69 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 MTCO2P33-201ENST00000402100 465 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 RPS20P14-201ENST00000412545 360 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC108145.1-201ENST00000503770 153 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 RN7SKP18-201ENST00000516005 275 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC025755.1-201ENST00000521306 278 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 RPL23AP53-201ENST00000521854 457 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 MIR4458-201ENST00000578872 75 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
COL13A1Q5TAT6 AC104623.2-202ENST00000623477 4002 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 Y_RNA.541-201ENST00000384640 113 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 SNORA40C-201ENST00000391285 128 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 Z85995.1-201ENST00000415547 335 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC005300.1-201ENST00000428401 373 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 RPL23AP81-201ENST00000455252 467 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 SERF1AP1-201ENST00000514575 187 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 RNU6-1012P-201ENST00000516606 109 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC090617.3-201ENST00000573670 475 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC240442.1-201ENST00000616055 283 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC097372.5-201ENST00000623665 376 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AC058791.1-201ENST00000608412 3198 ntBASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL13A1Q5TAT6 AL359693.1-201ENST00000614959 2407 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 Y_RNA.16-201ENST00000362421 102 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AL033519.2-201ENST00000403958 392 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 SNORA3.3-201ENST00000408712 125 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 RPL21P40-201ENST00000428586 483 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 RPL35AP21-201ENST00000437667 333 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AC124916.1-201ENST00000444020 547 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 RNA5SP103-201ENST00000459503 118 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 SEPT14P8-201ENST00000508026 178 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 AL137849.1-201ENST00000604767 169 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 RNU1-30P-201ENST00000606575 163 ntBASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL13A1Q5TAT6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL13A1Q5TAT6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL13A1Q5TAT6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL13A1Q5TAT6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL13A1Q5TAT6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL13A1Q5TAT6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms