Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGN3Q15651 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.32□□□□□ -2.36
HMGN3Q15651 AC245102.2-201ENST00000448956 180 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 AC132479.1-201ENST00000449160 144 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HMGN3Q15651 Y_RNA.638-201ENST00000459374 113 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 SUMO1P1-201ENST00000497904 306 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 RNU6-229P-201ENST00000516614 102 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGN3Q15651 ROCK1P1-201ENST00000573767 549 ntBASIC0.32□□□□□ -2.36
HMGN3Q15651 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.32□□□□□ -2.36
HMGN3Q15651 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.32□□□□□ -2.36
HMGN3Q15651 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HMGN3Q15651 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN3Q15651 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGN3Q15651 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 AC098934.3-201ENST00000430450 190 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 MTND1P33-201ENST00000446251 917 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 PRELID3BP1-201ENST00000457142 540 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN3Q15651 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN3Q15651 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN3Q15651 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.31□□□□□ -2.36
HMGN3Q15651 MIR4452-201ENST00000583004 71 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 MIR151B-201ENST00000584249 96 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 AC017037.3-201ENST00000625016 472 ntBASIC0.31□□□□□ -2.36
HMGN3Q15651 SNORD18A-201ENST00000363753 72 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 RNU2-33P-201ENST00000410344 192 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 NDUFS5P4-201ENST00000412983 318 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGN3Q15651 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGN3Q15651 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
HMGN3Q15651 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGN3Q15651 RPL21P47-201ENST00000483696 477 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGN3Q15651 AC108078.1-201ENST00000508073 725 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 CYCSP23-201ENST00000519781 313 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 HIGD1AP6-201ENST00000521833 279 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AC006199.1-201ENST00000548728 219 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGN3Q15651 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AC008751.2-201ENST00000597885 980 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
HMGN3Q15651 OR4G2P-201ENST00000328113 903 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 Y_RNA.4-201ENST00000362333 112 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGN3Q15651 RNU6-1235P-201ENST00000384559 107 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 EIF1P1-201ENST00000421436 341 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 SKA2P1-201ENST00000425592 390 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 AL591212.2-201ENST00000433923 257 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 AL353706.1-201ENST00000436728 494 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 RPL23AP35-201ENST00000451906 501 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 TPRKBP1-201ENST00000456243 481 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 RNU6-498P-201ENST00000459468 107 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 PDCD5P2-201ENST00000507570 312 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 RNA5SP121-201ENST00000516537 101 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGN3Q15651 NACAP3-201ENST00000552100 481 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN3Q15651 MZT1P2-201ENST00000604387 248 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.29□□□□□ -2.36
HMGN3Q15651 AC092608.3-201ENST00000625017 386 ntBASIC0.29□□□□□ -2.36
HMGN3Q15651 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGN3Q15651 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGN3Q15651 ELL2P3-201ENST00000457883 1602 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 SNORD33-201ENST00000362761 85 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 SNORA25.9-201ENST00000365087 128 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN3Q15651 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN3Q15651 PTGES3P4-201ENST00000426243 356 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 CETN4P-201ENST00000432407 469 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC112771.1-201ENST00000463581 102 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AL163195.1-201ENST00000496941 348 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 HMGN1P13-201ENST00000505795 138 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN3Q15651 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN3Q15651 AC117525.1-201ENST00000515228 503 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN3Q15651 AC012213.3-201ENST00000577199 777 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 SNORD39.3-201ENST00000584451 71 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 BNIP3P16-201ENST00000589779 534 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC004067.1-201ENST00000608733 700 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AF129408.1-201ENST00000608767 431 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN3Q15651 MTND1P37-201ENST00000636562 264 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 AC100821.1-201ENST00000523153 2479 ntBASIC0.28□□□□□ -2.36
HMGN3Q15651 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HMGN3Q15651 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HMGN3Q15651 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 SRIP3-201ENST00000413200 219 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 AC114482.1-201ENST00000418010 247 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.27□□□□□ -2.37
HMGN3Q15651 AC234064.1-201ENST00000436312 247 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 MTND4P6-201ENST00000438297 472 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 JTBP1-201ENST00000441314 247 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms