Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 Y_RNA.9-201ENST00000362354 101 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 SNORD14B-201ENST00000364533 90 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 RNU6-434P-201ENST00000384376 107 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 MIR10A-201ENST00000385043 110 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 MIR34A-201ENST00000385130 110 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 RNU6-750P-201ENST00000390946 107 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 SNORD70.1-201ENST00000391007 85 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL592148.1-201ENST00000413568 445 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL353621.1-201ENST00000418219 243 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 USP9YP27-201ENST00000418455 438 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AC063976.3-201ENST00000426849 329 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 SEPT14P3-201ENST00000439401 183 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL732372.2-207ENST00000445840 183 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 SEPT14P2-201ENST00000453405 183 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.18□□□□□ -1.9
UBE3AQ05086 RNU7-180P-201ENST00000459240 63 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.18□□□□□ -1.9
UBE3AQ05086 MTND3P25-201ENST00000509243 135 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.18□□□□□ -1.9
UBE3AQ05086 SEPT14P4-201ENST00000513445 186 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 RNA5SP401-201ENST00000515920 127 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 RN7SKP132-201ENST00000516001 208 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 RNU6-835P-201ENST00000516974 104 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.18□□□□□ -1.9
UBE3AQ05086 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.18□□□□□ -1.9
UBE3AQ05086 FO082796.1-201ENST00000523795 183 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.18□□□□□ -1.9
UBE3AQ05086 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBE3AQ05086 AL157687.1-201ENST00000554853 619 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AL035413.2-201ENST00000604801 525 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 AC004492.1-201ENST00000607036 742 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 uc_338.34-201ENST00000617467 174 ntBASIC3.18□□□□□ -1.9
UBE3AQ05086 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.18□□□□□ -1.9
UBE3AQ05086 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBE3AQ05086 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.18□□□□□ -1.9
UBE3AQ05086 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.18□□□□□ -1.9
UBE3AQ05086 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UBE3AQ05086 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UBE3AQ05086 AC010889.1-201ENST00000566193 2666 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
UBE3AQ05086 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBE3AQ05086 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 NDUFB4P5-201ENST00000415445 361 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AL358075.3-201ENST00000426289 226 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 TOMM20P4-201ENST00000427861 435 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 C8orf59P1-201ENST00000429930 303 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AL161651.1-201ENST00000440882 223 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 NIPA2P5-201ENST00000452282 464 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC092001.1-201ENST00000453012 261 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC074344.1-201ENST00000512823 224 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 MIR892C-201ENST00000516410 77 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 SNORD19.2-201ENST00000516978 73 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.17□□□□□ -1.9
UBE3AQ05086 MTND4P7-201ENST00000523876 130 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3AQ05086 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3AQ05086 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.17□□□□□ -1.9
UBE3AQ05086 AC136619.2-201ENST00000563361 631 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AC092325.1-201ENST00000566449 554 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 NRBF2P5-201ENST00000603087 788 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AC087045.1-201ENST00000605856 382 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 AL591516.1-201ENST00000611326 274 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBE3AQ05086 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
UBE3AQ05086 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
UBE3AQ05086 CDC27P3-201ENST00000635418 1910 ntBASIC3.17□□□□□ -1.9
UBE3AQ05086 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
UBE3AQ05086 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBE3AQ05086 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 RNU4-12P-201ENST00000365233 139 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3AQ05086 Y_RNA.402-201ENST00000383972 102 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 RPS4XP7-201ENST00000406274 780 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AL109933.2-201ENST00000452651 260 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3AQ05086 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBE3AQ05086 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3AQ05086 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 RNU4-29P-201ENST00000515943 174 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 RNU1-86P-201ENST00000516108 154 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms