Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.38□□□□□ -1.87
E2F1Q01094 AL590632.1-201ENST00000424289 371 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
E2F1Q01094 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.38□□□□□ -1.87
E2F1Q01094 Z82210.1-201ENST00000440037 231 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.38□□□□□ -1.87
E2F1Q01094 Y_RNA.639-201ENST00000458981 102 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC130509.1-201ENST00000464158 433 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 FCF1P8-201ENST00000510322 597 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 RNU1-86P-201ENST00000516108 154 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 RNU1-103P-201ENST00000516502 125 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 RNU1-107P-201ENST00000516617 154 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.38□□□□□ -1.87
E2F1Q01094 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
E2F1Q01094 AC025423.5-201ENST00000550230 219 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AL121821.2-201ENST00000556081 394 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 MIR4513-201ENST00000581077 86 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
E2F1Q01094 AC022432.1-201ENST00000595739 310 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC006023.2-201ENST00000609916 167 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC090971.5-201ENST00000621102 293 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
E2F1Q01094 AL732372.2-225ENST00000642124 456 ntBASIC3.38□□□□□ -1.87
E2F1Q01094 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.38□□□□□ -1.87
E2F1Q01094 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
E2F1Q01094 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
E2F1Q01094 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
E2F1Q01094 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 RNU6-214P-201ENST00000384130 107 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 RNU6-601P-201ENST00000384540 107 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 RNU6-95P-201ENST00000384697 107 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
E2F1Q01094 HSPE1P26-201ENST00000405341 275 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
E2F1Q01094 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 UBE2D3P2-201ENST00000424409 445 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 HMGB1P9-201ENST00000429856 646 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
E2F1Q01094 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
E2F1Q01094 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.37□□□□□ -1.87
E2F1Q01094 AC011005.2-201ENST00000487324 359 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 AC110794.1-201ENST00000505816 425 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.37□□□□□ -1.87
E2F1Q01094 MIR892C-201ENST00000516410 77 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.37□□□□□ -1.87
E2F1Q01094 AP003072.1-201ENST00000531740 145 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 AC026371.1-201ENST00000551867 419 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.37□□□□□ -1.87
E2F1Q01094 MIR4325-201ENST00000583049 90 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 Y_RNA.812-201ENST00000610788 101 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 Y_RNA.784-201ENST00000613803 101 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 Y_RNA.787-201ENST00000616522 101 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 Y_RNA.780-201ENST00000617336 101 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 Y_RNA.801-201ENST00000619005 101 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 AC010378.1-201ENST00000619270 362 ntBASIC3.37□□□□□ -1.87
E2F1Q01094 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
E2F1Q01094 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
E2F1Q01094 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
E2F1Q01094 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
E2F1Q01094 MIR412-201ENST00000362142 91 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 SNORD3E-201ENST00000362899 217 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNU6-283P-201ENST00000364788 107 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 Y_RNA.324-201ENST00000365165 102 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AL590004.1-201ENST00000405321 300 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNA5SP129-201ENST00000410276 118 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNU6-1304P-201ENST00000411374 106 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AL353729.1-201ENST00000425044 720 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 CECR9-201ENST00000453421 199 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AL049873.1-201ENST00000480540 376 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.36□□□□□ -1.87
E2F1Q01094 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 RNU6-1016P-201ENST00000516689 94 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AC009902.1-201ENST00000519351 183 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.36□□□□□ -1.87
E2F1Q01094 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
E2F1Q01094 AC020661.2-201ENST00000560114 134 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.36□□□□□ -1.87
E2F1Q01094 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 AC005034.5-201ENST00000604219 466 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AC136601.2-201ENST00000604356 474 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AC080078.3-201ENST00000605407 463 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
E2F1Q01094 AC134503.1-201ENST00000633048 54 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms