Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.66□□□□□ -1.82
CDC42EP1Q00587 MIR8057-201ENST00000620957 69 ntBASIC3.66□□□□□ -1.82
CDC42EP1Q00587 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.66□□□□□ -1.82
CDC42EP1Q00587 U6.99-201ENST00000637524 83 ntBASIC3.66□□□□□ -1.82
CDC42EP1Q00587 AC118273.1-201ENST00000525324 3006 ntBASIC3.66□□□□□ -1.82
CDC42EP1Q00587 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
CDC42EP1Q00587 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDC42EP1Q00587 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.66□□□□□ -1.82
CDC42EP1Q00587 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CDC42EP1Q00587 AC093010.3-201ENST00000570269 15214 ntBASIC3.65□□□□□ -1.82
CDC42EP1Q00587 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CDC42EP1Q00587 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 RNU6-525P-201ENST00000363685 104 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 MIR10A-201ENST00000385043 110 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL591034.1-201ENST00000407447 340 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL354751.2-201ENST00000415471 210 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 UBE2V1P4-201ENST00000425374 344 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC098614.2-201ENST00000426040 255 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL078601.1-201ENST00000444542 271 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 RPL9P32-201ENST00000464118 620 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC109925.1-201ENST00000478069 331 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 RNU1-54P-201ENST00000517181 120 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AL121821.2-201ENST00000556081 394 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC025946.2-201ENST00000603398 234 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC123912.5-201ENST00000605470 343 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 FTX_3.1-201ENST00000610451 147 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 CUL1P1-201ENST00000509510 2425 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDC42EP1Q00587 AC022336.2-201ENST00000568966 2538 ntBASIC3.65□□□□□ -1.83
CDC42EP1Q00587 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RNU6-593P-201ENST00000364716 112 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RNU6-1329P-201ENST00000365664 107 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RNU6-166P-201ENST00000384371 107 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 Y_RNA.579-201ENST00000390939 94 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 MTCYBP4-201ENST00000401524 249 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 BRK1P2-201ENST00000442875 223 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AC092798.1-201ENST00000458542 409 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AC116337.1-201ENST00000509680 687 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 PHBP14-201ENST00000512887 367 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 RNU6-1016P-201ENST00000516689 94 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AL645944.1-201ENST00000603857 493 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 uc_338.1-201ENST00000612113 180 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 AC091953.5-201ENST00000622919 233 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP1Q00587 ZNF807-201ENST00000328088 1707 ntBASIC3.64□□□□□ -1.83
CDC42EP1Q00587 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 MIR34A-201ENST00000385130 110 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AL445529.1-201ENST00000398713 389 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC245054.2-201ENST00000415639 319 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AF228730.4-201ENST00000421457 183 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 Z75741.1-201ENST00000446793 314 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 RNU6-1170P-201ENST00000515974 106 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms