Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
RAE1P78406 CYCSP39-201ENST00000565821 309 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
RAE1P78406 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
RAE1P78406 MTND4LP32-201ENST00000636111 270 ntBASIC3.18□□□□□ -1.9
RAE1P78406 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
RAE1P78406 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 AF117829.1-206ENST00000621883 3802 ntBASIC3.17□□□□□ -1.9
RAE1P78406 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.17□□□□□ -1.9
RAE1P78406 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAE1P78406 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAE1P78406 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
RAE1P78406 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAE1P78406 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAE1P78406 SNORD62.1-201ENST00000362541 86 ntBASIC3.17□□□□□ -1.9
RAE1P78406 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
RAE1P78406 RNU6-658P-201ENST00000384606 106 ntBASIC3.17□□□□□ -1.9
RAE1P78406 MIR218-2-201ENST00000385006 110 ntBASIC3.17□□□□□ -1.9
RAE1P78406 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAE1P78406 AL445529.1-201ENST00000398713 389 ntBASIC3.17□□□□□ -1.9
RAE1P78406 AL356057.2-201ENST00000403318 432 ntBASIC3.17□□□□□ -1.9
RAE1P78406 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 AL354751.2-201ENST00000415471 210 ntBASIC3.17□□□□□ -1.9
RAE1P78406 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAE1P78406 GOT2P5-201ENST00000433995 546 ntBASIC3.17□□□□□ -1.9
RAE1P78406 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.17□□□□□ -1.9
RAE1P78406 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAE1P78406 RNU7-152P-201ENST00000458982 64 ntBASIC3.17□□□□□ -1.9
RAE1P78406 RNU1-54P-201ENST00000517181 120 ntBASIC3.17□□□□□ -1.9
RAE1P78406 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
RAE1P78406 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.17□□□□□ -1.9
RAE1P78406 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
RAE1P78406 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.17□□□□□ -1.9
RAE1P78406 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.17□□□□□ -1.9
RAE1P78406 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.17□□□□□ -1.9
RAE1P78406 AC008962.1-201ENST00000605729 304 ntBASIC3.17□□□□□ -1.9
RAE1P78406 MIR6128-201ENST00000615528 109 ntBASIC3.17□□□□□ -1.9
RAE1P78406 AL391261.4-201ENST00000616012 481 ntBASIC3.17□□□□□ -1.9
RAE1P78406 SCARNA4-202ENST00000625402 129 ntBASIC3.17□□□□□ -1.9
RAE1P78406 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAE1P78406 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.16□□□□□ -1.9
RAE1P78406 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
RAE1P78406 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
RAE1P78406 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-37P-201ENST00000362692 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-1188P-201ENST00000363795 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-11P-201ENST00000364234 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-7-201ENST00000364784 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-8-201ENST00000365467 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 Z98749.2-208ENST00000381646 500 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-25P-201ENST00000383873 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-1-201ENST00000383898 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-48P-201ENST00000384161 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-36P-201ENST00000384172 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-4P-201ENST00000384205 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-5P-201ENST00000384238 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-3P-201ENST00000384314 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-16P-201ENST00000384385 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-15P-201ENST00000384534 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-2-201ENST00000384627 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-29P-201ENST00000384637 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-9-201ENST00000384776 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RNU6-33P-201ENST00000384793 107 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RPL5P18-201ENST00000406671 891 ntBASIC3.16□□□□□ -1.9
RAE1P78406 SNORD56-201ENST00000413522 71 ntBASIC3.16□□□□□ -1.9
RAE1P78406 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.16□□□□□ -1.9
RAE1P78406 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC099548.1-201ENST00000421443 426 ntBASIC3.16□□□□□ -1.9
RAE1P78406 RPL31P12-201ENST00000422587 358 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.16□□□□□ -1.9
RAE1P78406 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
RAE1P78406 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAE1P78406 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
RAE1P78406 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.16□□□□□ -1.9
RAE1P78406 AC034105.4-201ENST00000568304 277 ntBASIC3.16□□□□□ -1.9
RAE1P78406 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.16□□□□□ -1.9
RAE1P78406 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms