Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNU6-572P-201ENST00000516724 80 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 MTCO3P15-201ENST00000526563 574 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AP003122.4-201ENST00000530980 758 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AP004247.1-201ENST00000531556 1289 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.1□□□□□ -2.23
AP3S2P59780 AC012065.4-201ENST00000602445 679 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL355802.3-201ENST00000607571 545 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.1□□□□□ -2.23
AP3S2P59780 AL356094.1-201ENST00000624663 1212 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 FARSBP1-201ENST00000435808 1778 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
AP3S2P59780 RNU6-529P-201ENST00000363383 104 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 UBE2V1P2-201ENST00000397758 440 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AL590084.1-201ENST00000407885 387 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.09□□□□□ -2.23
AP3S2P59780 AC092634.2-201ENST00000428146 1010 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AL135790.2-201ENST00000437701 267 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC087477.1-201ENST00000465747 340 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC068587.2-201ENST00000478386 781 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC010409.1-201ENST00000487382 476 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.09□□□□□ -2.23
AP3S2P59780 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.09□□□□□ -2.23
AP3S2P59780 AL133153.1-201ENST00000557756 303 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC023813.2-201ENST00000564321 469 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.09□□□□□ -2.23
AP3S2P59780 AC012360.2-201ENST00000609349 391 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 uc_338.15-201ENST00000615470 191 ntBASIC1.09□□□□□ -2.23
AP3S2P59780 AC233981.2-201ENST00000611524 1614 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 Y_RNA.408-201ENST00000383987 102 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AL079342.2-201ENST00000403367 482 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 FTH1P15-201ENST00000406984 280 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AC068533.2-201ENST00000411872 306 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.08□□□□□ -2.24
AP3S2P59780 USP9YP18-201ENST00000425912 695 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.08□□□□□ -2.24
AP3S2P59780 RSL24D1P8-201ENST00000434442 492 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.08□□□□□ -2.24
AP3S2P59780 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.08□□□□□ -2.24
AP3S2P59780 USP9YP17-201ENST00000444617 696 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AC010486.1-201ENST00000511793 424 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.08□□□□□ -2.24
AP3S2P59780 RNY4P37-201ENST00000516225 96 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 RNU6-1225P-201ENST00000516336 65 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 RN7SKP256-201ENST00000517201 314 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.08□□□□□ -2.24
AP3S2P59780 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.08□□□□□ -2.24
AP3S2P59780 AC015720.1-201ENST00000565251 277 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.08□□□□□ -2.24
AP3S2P59780 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.08□□□□□ -2.24
AP3S2P59780 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.08□□□□□ -2.24
AP3S2P59780 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
AP3S2P59780 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
AP3S2P59780 U8.2-201ENST00000363156 134 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-23P-201ENST00000363283 107 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-60P-201ENST00000364792 103 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-744P-201ENST00000365557 107 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-207P-201ENST00000384137 107 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-1316P-201ENST00000384242 108 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.07□□□□□ -2.24
AP3S2P59780 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.07□□□□□ -2.24
AP3S2P59780 MTCO3P5-201ENST00000433620 714 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.07□□□□□ -2.24
AP3S2P59780 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RPL23AP35-201ENST00000451906 501 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 MTCYBP18-201ENST00000501056 747 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 RNU6-143P-201ENST00000516942 93 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC009902.1-201ENST00000519351 183 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC018630.3-201ENST00000542637 96 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 TRAV32-201ENST00000553993 340 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC012414.6-201ENST00000568241 401 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC126365.2-201ENST00000580630 379 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AP001542.1-201ENST00000591314 200 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC004987.4-201ENST00000603383 338 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC069545.1-201ENST00000605671 358 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC009318.2-201ENST00000610917 651 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
AP3S2P59780 AC009269.6-201ENST00000621778 588 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC093648.1-201ENST00000623546 606 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 AC231657.1-201ENST00000624313 397 ntBASIC1.07□□□□□ -2.24
AP3S2P59780 MIR449A-201ENST00000362113 91 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.06□□□□□ -2.24
AP3S2P59780 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 HMGB1P31-201ENST00000437242 427 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 RNU1-123P-201ENST00000458950 160 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 SNORD97-201ENST00000459187 142 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
AP3S2P59780 RNU6-150P-201ENST00000516237 95 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
AP3S2P59780 RAB11AP2-201ENST00000545905 639 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.06□□□□□ -2.24
AP3S2P59780 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
AP3S2P59780 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms