Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL020997.2-201ENST00000602607 184 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AL591516.1-201ENST00000611326 274 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AL161423.1-201ENST00000613700 262 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC138627.2-201ENST00000624202 601 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SUMO3P55854 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SUMO3P55854 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
SUMO3P55854 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.3□□□□□ -1.88
SUMO3P55854 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC073544.1-201ENST00000600110 1595 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC010889.1-201ENST00000566193 2666 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SUMO3P55854 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SUMO3P55854 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
SUMO3P55854 Y_RNA.67-201ENST00000362870 100 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 RNU6-428P-201ENST00000362942 107 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 RNU6-283P-201ENST00000364788 107 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 RNU6-601P-201ENST00000384540 107 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 MTND4P28-201ENST00000426217 387 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AL445584.1-201ENST00000431451 330 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 PCMTD1P1-201ENST00000455560 355 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.29□□□□□ -1.88
SUMO3P55854 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.29□□□□□ -1.88
SUMO3P55854 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.29□□□□□ -1.88
SUMO3P55854 RNU6-559P-201ENST00000516151 98 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 ACA59.2-201ENST00000517061 156 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.29□□□□□ -1.88
SUMO3P55854 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.29□□□□□ -1.88
SUMO3P55854 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.29□□□□□ -1.88
SUMO3P55854 AC009163.5-201ENST00000575421 637 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 CPDP1-201ENST00000579660 283 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC091152.3-201ENST00000604227 325 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC006077.1-201ENST00000604746 343 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC124303.1-201ENST00000605703 360 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC005046.1-201ENST00000608515 625 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC019193.3-201ENST00000609144 554 ntBASIC3.29□□□□□ -1.88
SUMO3P55854 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.29□□□□□ -1.88
SUMO3P55854 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.29□□□□□ -1.88
SUMO3P55854 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SUMO3P55854 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SUMO3P55854 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 MTND4P23-201ENST00000447723 1363 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SUMO3P55854 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
SUMO3P55854 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 RPL9P7-201ENST00000330965 580 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU6-858P-201ENST00000362436 107 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 Y_RNA.126-201ENST00000363382 111 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU6-527P-201ENST00000363425 104 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 Y_RNA.151-201ENST00000363566 112 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU6-105P-201ENST00000363909 104 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNA5SP51-201ENST00000364750 119 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 SNORD116-20-201ENST00000384529 92 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 Y_RNA.535-201ENST00000384612 99 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU4-14P-201ENST00000410858 122 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU6-325P-201ENST00000411132 105 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC245054.2-201ENST00000415639 319 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SUMO3P55854 AL035423.1-201ENST00000420331 213 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 PTGES3P4-201ENST00000426243 356 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC092017.2-201ENST00000427600 362 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.28□□□□□ -1.88
SUMO3P55854 AL591043.1-201ENST00000432461 424 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC236972.2-201ENST00000434979 310 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AL513043.1-201ENST00000439124 535 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC124916.1-201ENST00000444020 547 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AL133547.1-201ENST00000448546 220 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 Y_RNA.632-201ENST00000459189 102 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RPL9P9-202ENST00000466501 579 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC018437.1-201ENST00000492214 406 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RPL23AP49-201ENST00000492925 468 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU2-27P-201ENST00000516185 142 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 RNU6-1016P-201ENST00000516689 94 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.28□□□□□ -1.88
SUMO3P55854 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.28□□□□□ -1.88
SUMO3P55854 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.28□□□□□ -1.88
SUMO3P55854 SRGNP1-201ENST00000603392 451 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC009314.1-201ENST00000603871 304 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.28□□□□□ -1.88
SUMO3P55854 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.28□□□□□ -1.88
SUMO3P55854 AL133215.3-201ENST00000609801 448 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC034229.5-201ENST00000624258 185 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AL359757.2-201ENST00000624309 274 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SUMO3P55854 MIR3529-201ENST00000637713 78 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 FAM35DP-201ENST00000323387 2712 ntBASIC3.28□□□□□ -1.88
SUMO3P55854 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.28□□□□□ -1.89
SUMO3P55854 HAUS6P2-201ENST00000433254 2404 ntBASIC3.28□□□□□ -1.89
SUMO3P55854 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SUMO3P55854 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SUMO3P55854 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms