Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 AL139811.1-201ENST00000424779 2299 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU6-76P-201ENST00000384060 104 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 Y_RNA.462-201ENST00000384268 102 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU6-1203P-201ENST00000410703 110 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU2-25P-201ENST00000411041 191 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU2-71P-201ENST00000411395 189 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RPS6P12-201ENST00000432491 726 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 RPL7P5-201ENST00000471472 736 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 AC026784.1-201ENST00000507986 352 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU6-397P-201ENST00000516226 104 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 RNU6-570P-201ENST00000517051 105 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.09□□□□□ -1.75
NCKAP1LP55160 RPS29P30-201ENST00000600975 111 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 BDH2P1-201ENST00000602288 736 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 AL121772.2-201ENST00000614331 297 ntBASIC4.09□□□□□ -1.75
NCKAP1LP55160 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKAP1LP55160 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NCKAP1LP55160 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.09□□□□□ -1.76
NCKAP1LP55160 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NCKAP1LP55160 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NCKAP1LP55160 RNA5SP124-201ENST00000362739 110 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 RNU6-595P-201ENST00000363944 107 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 RNU6-338P-201ENST00000383888 105 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AL513475.1-201ENST00000406602 315 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC063979.1-201ENST00000415539 377 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 RPL21P38-201ENST00000418090 167 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC006946.1-201ENST00000429106 328 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 RN7SL542P-201ENST00000467147 294 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 S100A11P1-201ENST00000477525 312 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 HMGB1P35-201ENST00000503360 598 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 SUMO2P6-201ENST00000505273 288 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 SNORA31.6-201ENST00000516241 130 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 RN7SKP234-201ENST00000517173 224 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC130289.1-201ENST00000577321 73 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC067852.4-201ENST00000590314 478 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC244505.7-201ENST00000599675 272 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 BRDTP1-201ENST00000605735 677 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 MIR1244-1-201ENST00000612829 85 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AC034102.8-201ENST00000615146 484 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.08□□□□□ -1.76
NCKAP1LP55160 MIR1244-3-201ENST00000635744 85 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 MIR1244-2-201ENST00000636449 85 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 MIR1244-4-202ENST00000636813 85 ntBASIC4.08□□□□□ -1.76
NCKAP1LP55160 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NCKAP1LP55160 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NCKAP1LP55160 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 AP000560.1-201ENST00000624150 1937 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 ZNF299P-201ENST00000406845 1804 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 Y_RNA.29-201ENST00000362570 113 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 Y_RNA.84-201ENST00000363011 104 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU6-263P-201ENST00000363811 107 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU6-746P-201ENST00000384112 109 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 Y_RNA.471-201ENST00000384312 102 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 Y_RNA.533-201ENST00000384596 114 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 Y_RNA.592-201ENST00000410274 109 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU6-712P-201ENST00000410558 100 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 PRELID3BP1-201ENST00000457142 540 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU7-169P-201ENST00000459456 61 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 HMGN2P13-201ENST00000476476 274 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RPS23P5-201ENST00000495419 428 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 APOOP4-201ENST00000513530 597 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU1-86P-201ENST00000516108 154 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU6-927P-201ENST00000516199 100 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNU1-107P-201ENST00000516617 154 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 AC008011.1-201ENST00000545989 227 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 AL355877.2-201ENST00000603670 358 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms