Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.49□□□□□ -2.01
VCPP55072 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.49□□□□□ -2.01
VCPP55072 AL022238.1-201ENST00000442557 355 ntBASIC2.49□□□□□ -2.01
VCPP55072 MTND2P4-201ENST00000445034 1004 ntBASIC2.49□□□□□ -2.01
VCPP55072 OSTCP8-201ENST00000445117 448 ntBASIC2.49□□□□□ -2.01
VCPP55072 AC245517.4-201ENST00000448601 281 ntBASIC2.49□□□□□ -2.01
VCPP55072 RNU6-953P-201ENST00000459154 107 ntBASIC2.49□□□□□ -2.01
VCPP55072 SNORD42A-201ENST00000459584 64 ntBASIC2.49□□□□□ -2.01
VCPP55072 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.49□□□□□ -2.01
VCPP55072 AC098591.2-201ENST00000510152 315 ntBASIC2.49□□□□□ -2.01
VCPP55072 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.49□□□□□ -2.01
VCPP55072 AC091965.2-201ENST00000512324 613 ntBASIC2.49□□□□□ -2.01
VCPP55072 AC022447.1-201ENST00000515358 464 ntBASIC2.49□□□□□ -2.01
VCPP55072 MIR3682-201ENST00000581338 84 ntBASIC2.49□□□□□ -2.01
VCPP55072 AP002360.4-201ENST00000606980 481 ntBASIC2.49□□□□□ -2.01
VCPP55072 AL365204.3-201ENST00000612448 685 ntBASIC2.49□□□□□ -2.01
VCPP55072 AC011890.2-201ENST00000613393 294 ntBASIC2.49□□□□□ -2.01
VCPP55072 AP001506.1-201ENST00000615444 211 ntBASIC2.49□□□□□ -2.01
VCPP55072 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.49□□□□□ -2.01
VCPP55072 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.49□□□□□ -2.01
VCPP55072 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VCPP55072 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCPP55072 AC010329.5-201ENST00000623497 2174 ntBASIC2.49□□□□□ -2.01
VCPP55072 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VCPP55072 RNY4P34-201ENST00000364779 95 ntBASIC2.48□□□□□ -2.01
VCPP55072 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
VCPP55072 RNU6-297P-201ENST00000384636 107 ntBASIC2.48□□□□□ -2.01
VCPP55072 SNORA64-201ENST00000384674 134 ntBASIC2.48□□□□□ -2.01
VCPP55072 RNU6-220P-201ENST00000390919 107 ntBASIC2.48□□□□□ -2.01
VCPP55072 RNU2-68P-201ENST00000410878 191 ntBASIC2.48□□□□□ -2.01
VCPP55072 RN7SKP142-201ENST00000411236 328 ntBASIC2.48□□□□□ -2.01
VCPP55072 RPS12P24-201ENST00000412619 387 ntBASIC2.48□□□□□ -2.01
VCPP55072 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VCPP55072 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.48□□□□□ -2.01
VCPP55072 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AC104850.1-201ENST00000435940 476 ntBASIC2.48□□□□□ -2.01
VCPP55072 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.48□□□□□ -2.01
VCPP55072 RPL39P36-201ENST00000490784 156 ntBASIC2.48□□□□□ -2.01
VCPP55072 RPL23AP49-201ENST00000492925 468 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC023141.11-201ENST00000508864 202 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC117522.2-201ENST00000510049 657 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
VCPP55072 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AL359212.1-201ENST00000556608 614 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.48□□□□□ -2.01
VCPP55072 AC110760.3-201ENST00000598794 467 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC103810.6-201ENST00000606708 136 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC005332.10-201ENST00000612725 619 ntBASIC2.48□□□□□ -2.01
VCPP55072 AL158063.1-201ENST00000615349 536 ntBASIC2.48□□□□□ -2.01
VCPP55072 Z69908.1-201ENST00000622603 247 ntBASIC2.48□□□□□ -2.01
VCPP55072 ELL2P3-201ENST00000457883 1602 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC004520.1-201ENST00000608362 1413 ntBASIC2.48□□□□□ -2.01
VCPP55072 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
VCPP55072 RNU6-946P-201ENST00000383878 107 ntBASIC2.47□□□□□ -2.01
VCPP55072 RNU6-39P-201ENST00000384344 107 ntBASIC2.47□□□□□ -2.01
VCPP55072 RPS3AP36-201ENST00000398190 775 ntBASIC2.47□□□□□ -2.01
VCPP55072 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC127391.1-201ENST00000411737 98 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.47□□□□□ -2.01
VCPP55072 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.47□□□□□ -2.01
VCPP55072 RPL36AP53-201ENST00000432891 316 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC009961.2-201ENST00000435771 251 ntBASIC2.47□□□□□ -2.01
VCPP55072 GAPDHP17-201ENST00000449858 1001 ntBASIC2.47□□□□□ -2.01
VCPP55072 AL121769.1-201ENST00000469473 401 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC007182.2-201ENST00000489251 402 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC107222.1-201ENST00000510899 637 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.47□□□□□ -2.01
VCPP55072 Y_RNA.695-201ENST00000516715 107 ntBASIC2.47□□□□□ -2.01
VCPP55072 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.47□□□□□ -2.01
VCPP55072 AC022616.3-201ENST00000523940 148 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.47□□□□□ -2.01
VCPP55072 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC137800.2-201ENST00000574375 120 ntBASIC2.47□□□□□ -2.01
VCPP55072 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.47□□□□□ -2.01
VCPP55072 RPS15AP11-201ENST00000594193 385 ntBASIC2.47□□□□□ -2.01
VCPP55072 SEPT7P9-203ENST00000604116 343 ntBASIC2.47□□□□□ -2.01
VCPP55072 AC009318.2-201ENST00000610917 651 ntBASIC2.47□□□□□ -2.01
VCPP55072 DUSP12P1-201ENST00000612874 516 ntBASIC2.47□□□□□ -2.01
VCPP55072 AL133173.2-201ENST00000614270 90 ntBASIC2.47□□□□□ -2.01
VCPP55072 U2.21-201ENST00000637295 81 ntBASIC2.47□□□□□ -2.01
VCPP55072 MTND5P42-201ENST00000637720 498 ntBASIC2.47□□□□□ -2.01
VCPP55072 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VCPP55072 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.46□□□□□ -2.02
VCPP55072 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCPP55072 AC073343.1-201ENST00000328239 651 ntBASIC2.46□□□□□ -2.02
VCPP55072 RNY1P12-201ENST00000364251 105 ntBASIC2.46□□□□□ -2.02
VCPP55072 SNORA20.2-201ENST00000383922 131 ntBASIC2.46□□□□□ -2.02
VCPP55072 MIR1302-8-201ENST00000408342 128 ntBASIC2.46□□□□□ -2.02
VCPP55072 AC096649.2-201ENST00000416186 393 ntBASIC2.46□□□□□ -2.02
VCPP55072 BPY2DP-201ENST00000422208 265 ntBASIC2.46□□□□□ -2.02
VCPP55072 SKA2P1-201ENST00000425592 390 ntBASIC2.46□□□□□ -2.02
VCPP55072 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VCPP55072 HMGB1P9-201ENST00000429856 646 ntBASIC2.46□□□□□ -2.02
VCPP55072 Z98742.2-201ENST00000431564 187 ntBASIC2.46□□□□□ -2.02
VCPP55072 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.46□□□□□ -2.02
VCPP55072 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms