Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-74P-201ENST00000384235 107 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU2-2P-201ENST00000410396 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC104651.1-201ENST00000427559 735 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 MED13P1-201ENST00000428342 171 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC133104.1-201ENST00000429100 218 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC007919.1-201ENST00000429380 217 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGCS2P54868 RPS15AP9-201ENST00000439856 381 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 PIGFP3-201ENST00000441918 722 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 NEFMP1-201ENST00000443423 1006 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC013267.1-201ENST00000458227 267 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC098799.2-201ENST00000509466 868 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU6-826P-201ENST00000516827 104 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 RN7SKP40-201ENST00000517211 242 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AP003392.2-201ENST00000527269 208 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC068135.2-201ENST00000569293 1028 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL391840.1-201ENST00000571144 367 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGCS2P54868 AC073648.5-201ENST00000603502 305 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.6-201ENST00000603753 252 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.11-201ENST00000604059 253 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AC008162.1-201ENST00000604718 254 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.1-201ENST00000604752 252 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.5-201ENST00000605253 252 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.12-201ENST00000605291 253 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.8-201ENST00000605353 252 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL670379.7-201ENST00000605823 252 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 HULC.1-201ENST00000612720 240 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL589994.2-201ENST00000621124 579 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 AL137003.2-201ENST00000606924 2538 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HMGCS2P54868 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
HMGCS2P54868 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGCS2P54868 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGCS2P54868 RN7SKP226-201ENST00000364912 300 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 RNU6-946P-201ENST00000383878 107 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 RNU6-259P-201ENST00000383999 107 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AL358075.3-201ENST00000426289 226 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AL365496.1-201ENST00000426885 215 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.46□□□□□ -2.02
HMGCS2P54868 MTATP6P16-201ENST00000434543 526 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 HMGB1P18-201ENST00000438801 619 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 Z82210.1-201ENST00000440037 231 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 RPL23AP20-201ENST00000447965 421 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.46□□□□□ -2.02
HMGCS2P54868 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AC108078.1-201ENST00000508073 725 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 RNA5SP291-201ENST00000517222 105 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGCS2P54868 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGCS2P54868 AC103810.1-201ENST00000579873 453 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AL161798.1-201ENST00000604630 131 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 AL139286.2-201ENST00000606838 396 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HMGCS2P54868 AL365204.3-201ENST00000612448 685 ntBASIC2.46□□□□□ -2.02
HMGCS2P54868 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
HMGCS2P54868 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HMGCS2P54868 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.45□□□□□ -2.02
HMGCS2P54868 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HMGCS2P54868 RNU6-1167P-201ENST00000363227 94 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 Y_RNA.159-201ENST00000363674 87 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 RNY1P12-201ENST00000364251 105 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 RNU6-108P-201ENST00000365558 107 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 RNU6-1103P-201ENST00000384150 107 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 RNU6-217P-201ENST00000384164 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms