Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC093648.1-201ENST00000623546 606 ntBASIC2.78□□□□□ -1.96
LIMK1P53667 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.78□□□□□ -1.96
LIMK1P53667 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.78□□□□□ -1.96
LIMK1P53667 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.78□□□□□ -1.96
LIMK1P53667 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
LIMK1P53667 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
LIMK1P53667 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK1P53667 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIMK1P53667 AC103710.2-202ENST00000641454 2853 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIMK1P53667 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK1P53667 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LIMK1P53667 Y_RNA.367-201ENST00000365544 101 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK1P53667 RNU6-116P-201ENST00000384042 109 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 Y_RNA.576-201ENST00000384781 102 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RNU6-750P-201ENST00000390946 107 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AL139039.1-201ENST00000401900 692 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK1P53667 AC007064.1-201ENST00000412238 351 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AL451074.5-201ENST00000415894 435 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK1P53667 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIMK1P53667 AL160275.3-201ENST00000423876 471 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK1P53667 MTCO3P30-201ENST00000426425 670 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 CALM2P2-201ENST00000428512 440 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.77□□□□□ -1.97
LIMK1P53667 MTND1P29-201ENST00000448112 647 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC079382.1-201ENST00000493346 557 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 RNU5F-8P-201ENST00000515941 111 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK1P53667 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK1P53667 AP002963.1-201ENST00000530590 184 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LIMK1P53667 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.77□□□□□ -1.97
LIMK1P53667 AL121821.2-201ENST00000556081 394 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 LINC00933-203ENST00000559812 219 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC007151.1-201ENST00000572774 483 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC008521.1-201ENST00000587471 187 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK1P53667 AC092656.1-203ENST00000624134 423 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 AC009161.2-201ENST00000624626 138 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 CTSLP2-204ENST00000629029 392 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK1P53667 SEPT14P19-203ENST00000633205 211 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 MTND5P17-201ENST00000418405 1603 ntBASIC2.77□□□□□ -1.97
LIMK1P53667 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIMK1P53667 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LIMK1P53667 AC010889.1-201ENST00000566193 2666 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK1P53667 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK1P53667 RNU6-74P-201ENST00000384235 107 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 RNU6-1119P-201ENST00000384349 108 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 RNU2-9P-201ENST00000410194 145 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AL663109.1-201ENST00000411498 844 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC132479.1-201ENST00000449160 144 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 RNU7-182P-201ENST00000459009 62 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.76□□□□□ -1.97
LIMK1P53667 AC090096.1-201ENST00000489168 390 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 RPL37P25-201ENST00000507308 276 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK1P53667 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK1P53667 AC096725.1-201ENST00000514266 313 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK1P53667 RNU6-991P-201ENST00000516168 107 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC009902.1-201ENST00000519351 183 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 BTF3P12-201ENST00000519620 469 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
LIMK1P53667 AC080013.6-201ENST00000606185 215 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC009509.4-201ENST00000619202 509 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 AC131280.1-202ENST00000624067 4211 ntBASIC2.76□□□□□ -1.97
LIMK1P53667 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LIMK1P53667 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LIMK1P53667 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LIMK1P53667 SNORA67.1-201ENST00000364749 141 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 SNORD115-7-201ENST00000365306 82 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 MIR454-201ENST00000390180 115 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC016907.1-201ENST00000419483 435 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 BX276092.3-201ENST00000424182 230 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 MTCO2P11-201ENST00000431069 680 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.75□□□□□ -1.97
LIMK1P53667 AL078601.1-201ENST00000444542 271 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 HMGN2P10-201ENST00000448085 265 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 BTF3P15-201ENST00000455606 336 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 RPS29P21-201ENST00000496272 170 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC026801.1-201ENST00000497178 464 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms