Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 MIR494-201ENST00000349529 81 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 MIR300-201ENST00000401138 83 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.68□□□□□ -1.5
NUBP1P53384 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.68□□□□□ -1.5
NUBP1P53384 AL663074.2-201ENST00000440621 479 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 HMGN2P21-201ENST00000447764 270 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 SNORD11-201ENST00000459124 84 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 BX284632.1-201ENST00000478218 541 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 AC078817.1-201ENST00000492623 435 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 RNA5SP468-201ENST00000516782 93 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.68□□□□□ -1.5
NUBP1P53384 AC007751.1-201ENST00000529260 376 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.68□□□□□ -1.5
NUBP1P53384 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
NUBP1P53384 AC015720.1-201ENST00000565251 277 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 MIR5009-201ENST00000578736 100 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.68□□□□□ -1.5
NUBP1P53384 RNU1-30P-201ENST00000606575 163 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 AC002064.3-201ENST00000623448 346 ntBASIC5.68□□□□□ -1.5
NUBP1P53384 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
NUBP1P53384 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUBP1P53384 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.67□□□□□ -1.5
NUBP1P53384 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUBP1P53384 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUBP1P53384 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUBP1P53384 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUBP1P53384 INTS6P1-201ENST00000504674 2530 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 RNU1-43P-201ENST00000365052 165 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 RNU6-1292P-201ENST00000383856 107 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 MIR181B1-201ENST00000385240 110 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.67□□□□□ -1.5
NUBP1P53384 RNU1-88P-201ENST00000459274 128 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 TRAV8-5-201ENST00000537369 341 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 MIR3129-201ENST00000581095 76 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 MIR4753-201ENST00000585119 83 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.67□□□□□ -1.5
NUBP1P53384 AC107294.3-201ENST00000609211 526 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NUBP1P53384 AC006504.1-201ENST00000562493 3666 ntBASIC5.67□□□□□ -1.5
NUBP1P53384 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.66□□□□□ -1.5
NUBP1P53384 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.66□□□□□ -1.5
NUBP1P53384 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.66□□□□□ -1.5
NUBP1P53384 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 Z73965.1-201ENST00000623412 2297 ntBASIC5.66□□□□□ -1.5
NUBP1P53384 Y_RNA.198-201ENST00000364013 98 ntBASIC5.66□□□□□ -1.5
NUBP1P53384 MIR147B-201ENST00000390185 80 ntBASIC5.66□□□□□ -1.5
NUBP1P53384 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC5.66□□□□□ -1.5
NUBP1P53384 AC027419.1-201ENST00000522976 328 ntBASIC5.66□□□□□ -1.5
NUBP1P53384 MIR5095-201ENST00000578844 88 ntBASIC5.66□□□□□ -1.5
NUBP1P53384 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.66□□□□□ -1.5
NUBP1P53384 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.66□□□□□ -1.5
NUBP1P53384 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.66□□□□□ -1.5
NUBP1P53384 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUBP1P53384 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.66□□□□□ -1.5
NUBP1P53384 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.66□□□□□ -1.5
NUBP1P53384 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUBP1P53384 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUBP1P53384 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUBP1P53384 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUBP1P53384 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.65□□□□□ -1.5
NUBP1P53384 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NUBP1P53384 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NUBP1P53384 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.65□□□□□ -1.5
NUBP1P53384 Y_RNA.213-201ENST00000364178 111 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 SNORA70.2-201ENST00000364506 135 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 Y_RNA.486-201ENST00000384398 107 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 AC063976.3-201ENST00000426849 329 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 AC026421.1-201ENST00000519101 163 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 HMGB1P40-201ENST00000525121 540 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms