Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORA36C-201ENST00000384289 132 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RNU6-472P-201ENST00000384299 107 ntBASIC3.54□□□□□ -1.84
CLK3P49761 MIR199A2-201ENST00000385289 110 ntBASIC3.54□□□□□ -1.84
CLK3P49761 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC096664.2-201ENST00000411843 406 ntBASIC3.54□□□□□ -1.84
CLK3P49761 MRPS18CP6-201ENST00000423587 223 ntBASIC3.54□□□□□ -1.84
CLK3P49761 UBE2V1P4-201ENST00000425374 344 ntBASIC3.54□□□□□ -1.84
CLK3P49761 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RPS15AP10-201ENST00000432472 382 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC073910.1-201ENST00000445047 438 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RPS4XP13-201ENST00000483219 789 ntBASIC3.54□□□□□ -1.84
CLK3P49761 VN1R105P-201ENST00000486595 910 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RN7SL323P-201ENST00000494712 295 ntBASIC3.54□□□□□ -1.84
CLK3P49761 UBE2CP3-201ENST00000502715 450 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AL359273.1-201ENST00000510918 627 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RN7SKP21-201ENST00000516503 220 ntBASIC3.54□□□□□ -1.84
CLK3P49761 Y_RNA.689-201ENST00000516589 107 ntBASIC3.54□□□□□ -1.84
CLK3P49761 RN7SKP209-201ENST00000516888 304 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC023157.2-201ENST00000540596 141 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.54□□□□□ -1.84
CLK3P49761 AC025423.5-201ENST00000550230 219 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.54□□□□□ -1.84
CLK3P49761 ZNF192P1-203ENST00000565888 810 ntBASIC3.54□□□□□ -1.84
CLK3P49761 MIR3921-201ENST00000577308 85 ntBASIC3.54□□□□□ -1.84
CLK3P49761 MIR3160-1-201ENST00000577972 85 ntBASIC3.54□□□□□ -1.84
CLK3P49761 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.54□□□□□ -1.84
CLK3P49761 BDH2P1-201ENST00000602288 736 ntBASIC3.54□□□□□ -1.84
CLK3P49761 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
CLK3P49761 AL138825.1-201ENST00000618587 192 ntBASIC3.54□□□□□ -1.84
CLK3P49761 HSPA8P4-201ENST00000511877 1920 ntBASIC3.54□□□□□ -1.84
CLK3P49761 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLK3P49761 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CLK3P49761 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.53□□□□□ -1.84
CLK3P49761 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLK3P49761 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
CLK3P49761 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLK3P49761 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLK3P49761 RNU6-1059P-201ENST00000363752 98 ntBASIC3.53□□□□□ -1.84
CLK3P49761 Y_RNA.350-201ENST00000365409 98 ntBASIC3.53□□□□□ -1.84
CLK3P49761 SNORD14.1-201ENST00000365609 90 ntBASIC3.53□□□□□ -1.84
CLK3P49761 RNU6-190P-201ENST00000384154 102 ntBASIC3.53□□□□□ -1.84
CLK3P49761 RNU6-842P-201ENST00000384269 107 ntBASIC3.53□□□□□ -1.84
CLK3P49761 SNORA57.1-201ENST00000391227 145 ntBASIC3.53□□□□□ -1.84
CLK3P49761 RPL21P1-201ENST00000399532 476 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AL139039.1-201ENST00000401900 692 ntBASIC3.53□□□□□ -1.84
CLK3P49761 RPS4XP7-201ENST00000406274 780 ntBASIC3.53□□□□□ -1.84
CLK3P49761 MTHFD2P2-201ENST00000407725 247 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
CLK3P49761 CYCSP43-201ENST00000438233 310 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.53□□□□□ -1.84
CLK3P49761 RNU6-1132P-201ENST00000459214 107 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.53□□□□□ -1.84
CLK3P49761 AC114801.2-201ENST00000503825 781 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC007991.1-201ENST00000522680 631 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AP006587.4-201ENST00000526053 529 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.53□□□□□ -1.84
CLK3P49761 AC125232.2-201ENST00000592457 143 ntBASIC3.53□□□□□ -1.84
CLK3P49761 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.53□□□□□ -1.84
CLK3P49761 AC104763.2-201ENST00000604179 382 ntBASIC3.53□□□□□ -1.84
CLK3P49761 SDR42E1P2-201ENST00000614861 481 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC141273.2-201ENST00000618989 130 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AL354798.1-201ENST00000622505 329 ntBASIC3.53□□□□□ -1.84
CLK3P49761 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.53□□□□□ -1.84
CLK3P49761 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
CLK3P49761 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLK3P49761 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
CLK3P49761 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLK3P49761 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLK3P49761 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLK3P49761 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 Y_RNA.276-201ENST00000364732 109 ntBASIC3.52□□□□□ -1.85
CLK3P49761 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
CLK3P49761 Y_RNA.461-201ENST00000384263 103 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 RPL27AP8-201ENST00000424277 446 ntBASIC3.52□□□□□ -1.85
CLK3P49761 HMGB1P9-201ENST00000429856 646 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 RPL31P60-201ENST00000478450 367 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AC092436.3-201ENST00000511788 257 ntBASIC3.52□□□□□ -1.85
CLK3P49761 SNORA40.14-201ENST00000516543 86 ntBASIC3.52□□□□□ -1.85
CLK3P49761 RNU6-352P-201ENST00000516908 107 ntBASIC3.52□□□□□ -1.85
CLK3P49761 RNU6-677P-201ENST00000516914 101 ntBASIC3.52□□□□□ -1.85
CLK3P49761 Y_RNA.715-201ENST00000517082 110 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AC022695.1-201ENST00000522089 237 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 AC007375.1-201ENST00000554513 578 ntBASIC3.52□□□□□ -1.85
CLK3P49761 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.52□□□□□ -1.85
CLK3P49761 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms