Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
RPL3P39023 SNORA31.19-201ENST00000517079 126 ntBASIC2.94□□□□□ -1.94
RPL3P39023 CYCSP27-201ENST00000527643 293 ntBASIC2.94□□□□□ -1.94
RPL3P39023 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL3P39023 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RPL3P39023 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL3P39023 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL3P39023 H3F3AP1-201ENST00000559984 334 ntBASIC2.94□□□□□ -1.94
RPL3P39023 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL3P39023 MIR4795-201ENST00000584182 89 ntBASIC2.94□□□□□ -1.94
RPL3P39023 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL3P39023 AC023043.2-201ENST00000589678 1026 ntBASIC2.94□□□□□ -1.94
RPL3P39023 HSPE1P7-201ENST00000604681 321 ntBASIC2.94□□□□□ -1.94
RPL3P39023 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.94□□□□□ -1.94
RPL3P39023 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL3P39023 uc_338.15-201ENST00000615470 191 ntBASIC2.94□□□□□ -1.94
RPL3P39023 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
RPL3P39023 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL3P39023 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL3P39023 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL3P39023 MTCO1P12-201ENST00000414273 1543 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AF117829.1-206ENST00000621883 3802 ntBASIC2.93□□□□□ -1.94
RPL3P39023 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL3P39023 AC005183.1-201ENST00000603687 1979 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AL353743.1-202ENST00000431724 1695 ntBASIC2.93□□□□□ -1.94
RPL3P39023 MIR412-201ENST00000362142 91 ntBASIC2.93□□□□□ -1.94
RPL3P39023 Y_RNA.135-201ENST00000363439 95 ntBASIC2.93□□□□□ -1.94
RPL3P39023 Y_RNA.212-201ENST00000364177 102 ntBASIC2.93□□□□□ -1.94
RPL3P39023 SNORA51.4-201ENST00000364993 124 ntBASIC2.93□□□□□ -1.94
RPL3P39023 Y_RNA.339-201ENST00000365325 102 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AL357075.1-201ENST00000404107 726 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
RPL3P39023 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL3P39023 RPL7P10-201ENST00000417407 739 ntBASIC2.93□□□□□ -1.94
RPL3P39023 TMEM167AP1-201ENST00000423409 219 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL3P39023 RPL7P37-201ENST00000425095 738 ntBASIC2.93□□□□□ -1.94
RPL3P39023 SKA2P1-201ENST00000425592 390 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RPL32P28-201ENST00000443577 397 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL3P39023 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL3P39023 AC233279.1-201ENST00000455300 423 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RN7SL863P-201ENST00000462370 296 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC008155.2-201ENST00000464337 397 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC104472.2-201ENST00000469035 601 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
RPL3P39023 MIR892C-201ENST00000516410 77 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RNU6-566P-201ENST00000516790 107 ntBASIC2.93□□□□□ -1.94
RPL3P39023 RNU6-323P-201ENST00000521915 107 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL3P39023 AP005639.2-201ENST00000527592 928 ntBASIC2.93□□□□□ -1.94
RPL3P39023 HPRT1P3-201ENST00000539521 576 ntBASIC2.93□□□□□ -1.94
RPL3P39023 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL3P39023 HMGB1P14-201ENST00000557424 591 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL3P39023 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL3P39023 AC005668.1-201ENST00000571142 476 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AL355375.2-201ENST00000574825 175 ntBASIC2.93□□□□□ -1.94
RPL3P39023 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.93□□□□□ -1.94
RPL3P39023 APOOP1-201ENST00000604695 592 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC123912.5-201ENST00000605470 343 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AC104237.2-201ENST00000612456 443 ntBASIC2.93□□□□□ -1.94
RPL3P39023 AL138726.1-201ENST00000614873 333 ntBASIC2.93□□□□□ -1.94
RPL3P39023 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL3P39023 MIR1302-1-201ENST00000637932 143 ntBASIC2.93□□□□□ -1.94
RPL3P39023 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL3P39023 AC118273.1-201ENST00000525324 3006 ntBASIC2.93□□□□□ -1.94
RPL3P39023 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL3P39023 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RPL3P39023 CUL1P1-201ENST00000509510 2425 ntBASIC2.92□□□□□ -1.94
RPL3P39023 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RPL3P39023 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL3P39023 RNU6-778P-201ENST00000363269 103 ntBASIC2.92□□□□□ -1.94
RPL3P39023 Y_RNA.813-201ENST00000364639 102 ntBASIC2.92□□□□□ -1.94
RPL3P39023 Y_RNA.324-201ENST00000365165 102 ntBASIC2.92□□□□□ -1.94
RPL3P39023 Y_RNA.480-201ENST00000384364 102 ntBASIC2.92□□□□□ -1.94
RPL3P39023 RPS4XP3-201ENST00000398541 413 ntBASIC2.92□□□□□ -1.94
RPL3P39023 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
RPL3P39023 RNU4-14P-201ENST00000410858 122 ntBASIC2.92□□□□□ -1.94
RPL3P39023 Y_RNA.623-201ENST00000411128 95 ntBASIC2.92□□□□□ -1.94
RPL3P39023 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
RPL3P39023 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL3P39023 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL3P39023 BRK1P2-201ENST00000442875 223 ntBASIC2.92□□□□□ -1.94
RPL3P39023 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.92□□□□□ -1.94
RPL3P39023 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL3P39023 AC092798.1-201ENST00000458542 409 ntBASIC2.92□□□□□ -1.94
RPL3P39023 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL3P39023 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
RPL3P39023 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL3P39023 RNU6-703P-201ENST00000516946 107 ntBASIC2.92□□□□□ -1.94
RPL3P39023 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL3P39023 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.92□□□□□ -1.94
RPL3P39023 COPS8P3-201ENST00000526024 482 ntBASIC2.92□□□□□ -1.94
RPL3P39023 AP005597.4-201ENST00000526762 229 ntBASIC2.92□□□□□ -1.94
RPL3P39023 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL3P39023 POLR3GP2-201ENST00000588366 668 ntBASIC2.92□□□□□ -1.94
RPL3P39023 AL022345.1-201ENST00000607292 135 ntBASIC2.92□□□□□ -1.94
RPL3P39023 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms