Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNU6-1053P-201ENST00000515930 101 ntBASIC0.44□□□□□ -2.34
SNCAP37840 RNU6-197P-201ENST00000516680 100 ntBASIC0.44□□□□□ -2.34
SNCAP37840 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.44□□□□□ -2.34
SNCAP37840 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.44□□□□□ -2.34
SNCAP37840 AC004812.1-201ENST00000540773 146 ntBASIC0.44□□□□□ -2.34
SNCAP37840 AC008088.1-201ENST00000580993 280 ntBASIC0.44□□□□□ -2.34
SNCAP37840 AL357094.1-201ENST00000603845 844 ntBASIC0.44□□□□□ -2.34
SNCAP37840 AP000860.1-201ENST00000605250 559 ntBASIC0.44□□□□□ -2.34
SNCAP37840 MIR6767-201ENST00000637302 66 ntBASIC0.44□□□□□ -2.34
SNCAP37840 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.44□□□□□ -2.34
SNCAP37840 MTCO1P9-201ENST00000505577 1534 ntBASIC0.43□□□□□ -2.34
SNCAP37840 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SNCAP37840 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
SNCAP37840 Z86062.1-201ENST00000406773 777 ntBASIC0.43□□□□□ -2.34
SNCAP37840 SRIP3-201ENST00000413200 219 ntBASIC0.43□□□□□ -2.34
SNCAP37840 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.43□□□□□ -2.34
SNCAP37840 PSMA6P3-201ENST00000428242 164 ntBASIC0.43□□□□□ -2.34
SNCAP37840 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.43□□□□□ -2.34
SNCAP37840 CYCSP23-201ENST00000519781 313 ntBASIC0.43□□□□□ -2.34
SNCAP37840 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.43□□□□□ -2.34
SNCAP37840 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 CYP4A27P-201ENST00000567218 190 ntBASIC0.43□□□□□ -2.34
SNCAP37840 MIR3937-201ENST00000580135 106 ntBASIC0.43□□□□□ -2.34
SNCAP37840 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.43□□□□□ -2.34
SNCAP37840 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.43□□□□□ -2.34
SNCAP37840 GAS5-AS1-201ENST00000602767 694 ntBASIC0.43□□□□□ -2.34
SNCAP37840 DUXAP11-201ENST00000603858 526 ntBASIC0.43□□□□□ -2.34
SNCAP37840 BNIP3P10-201ENST00000605360 577 ntBASIC0.43□□□□□ -2.34
SNCAP37840 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.43□□□□□ -2.34
SNCAP37840 AL132822.1-201ENST00000617063 513 ntBASIC0.43□□□□□ -2.34
SNCAP37840 AC138627.2-201ENST00000624202 601 ntBASIC0.43□□□□□ -2.34
SNCAP37840 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.43□□□□□ -2.34
SNCAP37840 MIR19B1-201ENST00000384829 87 ntBASIC0.42□□□□□ -2.34
SNCAP37840 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.42□□□□□ -2.34
SNCAP37840 RPL22P22-201ENST00000395439 379 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.42□□□□□ -2.34
SNCAP37840 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.42□□□□□ -2.34
SNCAP37840 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.42□□□□□ -2.34
SNCAP37840 AL035666.1-201ENST00000446195 348 ntBASIC0.42□□□□□ -2.34
SNCAP37840 OR2AQ1P-201ENST00000451972 200 ntBASIC0.42□□□□□ -2.34
SNCAP37840 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.42□□□□□ -2.34
SNCAP37840 DEFB108E-201ENST00000524692 240 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AP000763.2-201ENST00000540641 163 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.42□□□□□ -2.34
SNCAP37840 AL121821.2-201ENST00000556081 394 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.42□□□□□ -2.34
SNCAP37840 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.42□□□□□ -2.34
SNCAP37840 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.42□□□□□ -2.34
SNCAP37840 AP001429.1-201ENST00000602568 530 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AL583856.2-201ENST00000606298 543 ntBASIC0.42□□□□□ -2.34
SNCAP37840 AC079416.3-201ENST00000624479 549 ntBASIC0.42□□□□□ -2.34
SNCAP37840 OR4G3P-201ENST00000633500 913 ntBASIC0.42□□□□□ -2.34
SNCAP37840 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.41□□□□□ -2.34
SNCAP37840 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SNCAP37840 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SNCAP37840 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.41□□□□□ -2.34
SNCAP37840 AC083875.1-201ENST00000419509 405 ntBASIC0.41□□□□□ -2.34
SNCAP37840 UBE2V1P8-201ENST00000437166 265 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AL078601.1-201ENST00000444542 271 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AL441985.1-201ENST00000457727 251 ntBASIC0.41□□□□□ -2.34
SNCAP37840 OR9N1P-202ENST00000494289 481 ntBASIC0.41□□□□□ -2.34
SNCAP37840 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.41□□□□□ -2.34
SNCAP37840 RNA5SP384-201ENST00000516615 116 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC109329.1-201ENST00000518744 317 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.41□□□□□ -2.34
SNCAP37840 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.41□□□□□ -2.34
SNCAP37840 AC005951.2-201ENST00000576282 495 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC005786.1-201ENST00000588553 154 ntBASIC0.41□□□□□ -2.34
SNCAP37840 BNIP3P16-201ENST00000589779 534 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.41□□□□□ -2.34
SNCAP37840 CLIC4P2-201ENST00000601934 717 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC112220.3-201ENST00000605502 502 ntBASIC0.41□□□□□ -2.34
SNCAP37840 Z82243.1-201ENST00000609432 473 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC009033.1-201ENST00000624279 431 ntBASIC0.41□□□□□ -2.34
SNCAP37840 AC009541.1-201ENST00000438279 2662 ntBASIC0.41□□□□□ -2.34
SNCAP37840 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SNCAP37840 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.41□□□□□ -2.34
SNCAP37840 MIR96-201ENST00000362288 78 ntBASIC0.4□□□□□ -2.35
SNCAP37840 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.4□□□□□ -2.35
SNCAP37840 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.4□□□□□ -2.35
SNCAP37840 MTCYBP38-201ENST00000417160 1123 ntBASIC0.4□□□□□ -2.35
SNCAP37840 FO393414.1-201ENST00000428697 1184 ntBASIC0.4□□□□□ -2.35
SNCAP37840 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.4□□□□□ -2.35
SNCAP37840 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.4□□□□□ -2.35
SNCAP37840 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.4□□□□□ -2.35
SNCAP37840 AC019176.1-201ENST00000518519 225 ntBASIC0.4□□□□□ -2.35
SNCAP37840 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.4□□□□□ -2.35
SNCAP37840 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.4□□□□□ -2.35
SNCAP37840 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.4□□□□□ -2.35
SNCAP37840 MIR4298-201ENST00000584380 73 ntBASIC0.4□□□□□ -2.35
SNCAP37840 FAM106DP-201ENST00000586416 501 ntBASIC0.4□□□□□ -2.35
SNCAP37840 AC004805.2-201ENST00000605382 482 ntBASIC0.4□□□□□ -2.35
SNCAP37840 AC090970.3-201ENST00000612566 866 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms