Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 VPS26BP1-201ENST00000417155 755 ntBASIC1.54□□□□□ -2.16
RPA3P35244 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.54□□□□□ -2.16
RPA3P35244 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
RPA3P35244 KATNBL1P6-201ENST00000453433 915 ntBASIC1.54□□□□□ -2.16
RPA3P35244 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
RPA3P35244 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
RPA3P35244 MTCYBP43-201ENST00000513621 740 ntBASIC1.54□□□□□ -2.16
RPA3P35244 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.54□□□□□ -2.16
RPA3P35244 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
RPA3P35244 RPL30P11-203ENST00000598995 310 ntBASIC1.54□□□□□ -2.16
RPA3P35244 AL512643.1-201ENST00000635735 524 ntBASIC1.54□□□□□ -2.16
RPA3P35244 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.54□□□□□ -2.16
RPA3P35244 AC138393.1-203ENST00000327086 343 ntBASIC1.53□□□□□ -2.16
RPA3P35244 RNU5A-8P-201ENST00000364102 114 ntBASIC1.53□□□□□ -2.16
RPA3P35244 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPA3P35244 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
RPA3P35244 FTH1P15-201ENST00000406984 280 ntBASIC1.53□□□□□ -2.16
RPA3P35244 FCF1P10-201ENST00000407590 479 ntBASIC1.53□□□□□ -2.16
RPA3P35244 RPS12P24-201ENST00000412619 387 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.53□□□□□ -2.16
RPA3P35244 TEX21P-201ENST00000447107 1476 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 AL137159.1-201ENST00000452808 512 ntBASIC1.53□□□□□ -2.16
RPA3P35244 RPS3AP22-201ENST00000488297 769 ntBASIC1.53□□□□□ -2.16
RPA3P35244 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPA3P35244 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 MTND1P36-201ENST00000522384 936 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.53□□□□□ -2.16
RPA3P35244 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA3P35244 AC015712.3-201ENST00000559380 164 ntBASIC1.53□□□□□ -2.16
RPA3P35244 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AC009977.1-201ENST00000586015 570 ntBASIC1.53□□□□□ -2.16
RPA3P35244 MTND3P19-201ENST00000603825 345 ntBASIC1.53□□□□□ -2.16
RPA3P35244 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AC025754.2-201ENST00000606491 432 ntBASIC1.53□□□□□ -2.16
RPA3P35244 RNU6-91P-201ENST00000607774 107 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AC097468.3-201ENST00000607956 456 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AL355472.4-201ENST00000610233 626 ntBASIC1.53□□□□□ -2.16
RPA3P35244 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.52□□□□□ -2.17
RPA3P35244 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AC008267.5-201ENST00000424928 265 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AL513185.2-201ENST00000425543 193 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.52□□□□□ -2.17
RPA3P35244 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.52□□□□□ -2.17
RPA3P35244 RNA5SP216-201ENST00000516111 123 ntBASIC1.52□□□□□ -2.17
RPA3P35244 RNU6-667P-201ENST00000517186 102 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
RPA3P35244 AC010376.1-201ENST00000522101 334 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.52□□□□□ -2.17
RPA3P35244 CYCSP27-201ENST00000527643 293 ntBASIC1.52□□□□□ -2.17
RPA3P35244 DUXAP5-201ENST00000529668 529 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.52□□□□□ -2.17
RPA3P35244 RPS3AP4-201ENST00000555161 764 ntBASIC1.52□□□□□ -2.17
RPA3P35244 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.52□□□□□ -2.17
RPA3P35244 AC018638.7-201ENST00000605836 1114 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AC106052.1-201ENST00000608029 497 ntBASIC1.52□□□□□ -2.17
RPA3P35244 AC106858.1-201ENST00000637497 429 ntBASIC1.52□□□□□ -2.17
RPA3P35244 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPA3P35244 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
RPA3P35244 Y_RNA.465-201ENST00000384293 102 ntBASIC1.51□□□□□ -2.17
RPA3P35244 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
RPA3P35244 SNORA40.19-201ENST00000390846 128 ntBASIC1.51□□□□□ -2.17
RPA3P35244 RNU6-817P-201ENST00000391083 104 ntBASIC1.51□□□□□ -2.17
RPA3P35244 OR9R1P-201ENST00000412200 877 ntBASIC1.51□□□□□ -2.17
RPA3P35244 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.51□□□□□ -2.17
RPA3P35244 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.51□□□□□ -2.17
RPA3P35244 TXNL1P1-201ENST00000429528 554 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AC108059.3-201ENST00000456388 214 ntBASIC1.51□□□□□ -2.17
RPA3P35244 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.51□□□□□ -2.17
RPA3P35244 AC006512.1-201ENST00000468816 291 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AC104982.1-201ENST00000478775 574 ntBASIC1.51□□□□□ -2.17
RPA3P35244 FO393415.2-201ENST00000480085 343 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.51□□□□□ -2.17
RPA3P35244 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.51□□□□□ -2.17
RPA3P35244 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
RPA3P35244 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.51□□□□□ -2.17
RPA3P35244 AC136619.2-201ENST00000563361 631 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AC093249.1-201ENST00000567049 203 ntBASIC1.51□□□□□ -2.17
RPA3P35244 AC025678.1-201ENST00000567861 338 ntBASIC1.51□□□□□ -2.17
RPA3P35244 SNRPGP17-201ENST00000603780 214 ntBASIC1.51□□□□□ -2.17
RPA3P35244 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.51□□□□□ -2.17
RPA3P35244 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPA3P35244 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RPA3P35244 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPA3P35244 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPA3P35244 SNORD114-19-201ENST00000363072 75 ntBASIC1.5□□□□□ -2.17
RPA3P35244 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
RPA3P35244 SNORA4.3-201ENST00000365564 137 ntBASIC1.5□□□□□ -2.17
RPA3P35244 RNU6-166P-201ENST00000384371 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms