Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MTND5P26-201ENST00000426018 1752 ntBASIC2.54□□□□□ -2
CHRNA3P32297 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHRNA3P32297 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHRNA3P32297 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHRNA3P32297 MTND4P5-201ENST00000435821 1374 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHRNA3P32297 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CHRNA3P32297 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHRNA3P32297 RNU6-259P-201ENST00000383999 107 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RNU6-1103P-201ENST00000384150 107 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RNU6-14P-201ENST00000384630 106 ntBASIC2.53□□□□□ -2
CHRNA3P32297 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
CHRNA3P32297 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RNU6-220P-201ENST00000390919 107 ntBASIC2.53□□□□□ -2
CHRNA3P32297 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.53□□□□□ -2
CHRNA3P32297 PIGFP2-201ENST00000421400 651 ntBASIC2.53□□□□□ -2
CHRNA3P32297 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 MTND1P3-201ENST00000484956 952 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RPL39P36-201ENST00000490784 156 ntBASIC2.53□□□□□ -2
CHRNA3P32297 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA3P32297 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 RNU6-143P-201ENST00000516942 93 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA3P32297 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA3P32297 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA3P32297 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA3P32297 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.53□□□□□ -2
CHRNA3P32297 AC091152.3-201ENST00000604227 325 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AL022154.1-201ENST00000604698 785 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AL021997.1-201ENST00000605757 193 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AL391813.2-201ENST00000609113 322 ntBASIC2.53□□□□□ -2
CHRNA3P32297 uc_338.14-201ENST00000613162 166 ntBASIC2.53□□□□□ -2
CHRNA3P32297 HMGB1P24-202ENST00000615653 685 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AC073534.2-201ENST00000620377 381 ntBASIC2.53□□□□□ -2
CHRNA3P32297 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
CHRNA3P32297 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHRNA3P32297 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHRNA3P32297 Y_RNA.3-201ENST00000362331 103 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 Y_RNA.41-201ENST00000362646 102 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 RNY3P13-201ENST00000365542 102 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 RNU5A-6P-201ENST00000384136 116 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 U3.37-201ENST00000408528 213 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 Y_RNA.599-201ENST00000410489 109 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 USP9YP6-201ENST00000413550 854 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA3P32297 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 AL136380.1-201ENST00000447970 162 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 AL121769.1-201ENST00000469473 401 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA3P32297 HMGB1P29-201ENST00000505659 499 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC108078.1-201ENST00000508073 725 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 SCARNA3-201ENST00000517097 143 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CHRNA3P32297 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 AP003392.2-201ENST00000527269 208 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA3P32297 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 MIR3913-1-201ENST00000577744 102 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 MIR3167-201ENST00000579623 85 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA3P32297 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC008121.1-201ENST00000603244 268 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC073648.5-201ENST00000603502 305 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC007363.1-201ENST00000604736 620 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC004492.1-201ENST00000607036 742 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 MIR6715A-201ENST00000615929 79 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
CHRNA3P32297 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA3P32297 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA3P32297 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CHRNA3P32297 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHRNA3P32297 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA3P32297 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA3P32297 RNU5E-1-201ENST00000362477 120 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 RNU6-511P-201ENST00000363496 107 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 RNU6-188P-201ENST00000364207 107 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 XGY1-201ENST00000381172 446 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 MRPL42P2-201ENST00000403169 426 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.51□□□□□ -2.01
CHRNA3P32297 RPS3AP44-201ENST00000425466 790 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA3P32297 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.51□□□□□ -2.01
CHRNA3P32297 BRK1P2-201ENST00000442875 223 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 AC079448.1-201ENST00000449377 373 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA3P32297 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
CHRNA3P32297 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.51□□□□□ -2.01
CHRNA3P32297 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.51□□□□□ -2.01
CHRNA3P32297 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms