Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL049641.1-201ENST00000441055 1948 ntBASIC3.59□□□□□ -1.83
SLC6A4P31645 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SLC6A4P31645 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.84
SLC6A4P31645 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 MTND5P19-201ENST00000424872 1794 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A4P31645 RNU6-474P-201ENST00000384243 107 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 RNU6-1050P-201ENST00000410388 107 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 Y_RNA.623-201ENST00000411128 95 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC6A4P31645 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A4P31645 AL096701.2-201ENST00000416920 238 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC092047.1-201ENST00000424997 240 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A4P31645 HIGD1AP11-201ENST00000438361 280 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A4P31645 CECR9-201ENST00000453421 199 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 SNORA59A-201ENST00000459326 152 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC026784.1-201ENST00000507986 352 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC097473.1-201ENST00000508142 408 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC026782.1-201ENST00000512952 449 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 RNU6-976P-201ENST00000516086 111 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 RNU1-86P-201ENST00000516108 154 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 RNU1-107P-201ENST00000516617 154 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 RNA5SP165-201ENST00000517142 115 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 IGKV2-26-201ENST00000518305 343 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.58□□□□□ -1.84
SLC6A4P31645 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A4P31645 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC6A4P31645 ELOCP31-201ENST00000540463 467 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 SNRPGP18-201ENST00000553000 214 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AP000654.2-201ENST00000605633 586 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 AC244517.12-201ENST00000623581 663 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
SLC6A4P31645 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC6A4P31645 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A4P31645 AC068647.1-201ENST00000489539 2265 ntBASIC3.58□□□□□ -1.84
SLC6A4P31645 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A4P31645 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A4P31645 AC093908.1-201ENST00000623125 8092 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A4P31645 RNU1-33P-201ENST00000364249 162 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 SNORD14B-201ENST00000364533 90 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 SNORA75B-201ENST00000384053 137 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 RNU6-310P-201ENST00000384655 107 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 RNVU1-14-201ENST00000384770 164 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 Z98941.1-201ENST00000407764 100 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A4P31645 Z82205.1-201ENST00000428456 297 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A4P31645 SNRPEP9-201ENST00000436794 238 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 SNORD5.1-201ENST00000458800 75 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 Y_RNA.711-201ENST00000516993 102 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AC009902.1-201ENST00000519351 183 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AC022634.1-201ENST00000520765 532 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A4P31645 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A4P31645 AC011471.1-201ENST00000585766 187 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 ELOCP5-201ENST00000604924 333 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AL133383.2-201ENST00000622958 2336 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A4P31645 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
SLC6A4P31645 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A4P31645 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC6A4P31645 FAM35BP-202ENST00000497389 3337 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A4P31645 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC6A4P31645 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SLC6A4P31645 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC6A4P31645 Y_RNA.112-201ENST00000363250 102 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 RNU6-1040P-201ENST00000383974 107 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 SNORA40C-201ENST00000391285 128 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC6A4P31645 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC6A4P31645 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 AL158071.1-201ENST00000430315 461 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A4P31645 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A4P31645 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A4P31645 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 MTCO3P10-201ENST00000455912 772 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
SLC6A4P31645 RNU6-1045P-201ENST00000516321 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms