Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 CYCSP27-201ENST00000527643 293 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.96□□□□□ -1.94
ABCD3P28288 AC090115.3-201ENST00000553218 849 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 OR11H5P-201ENST00000554039 926 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.96□□□□□ -1.94
ABCD3P28288 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.96□□□□□ -1.94
ABCD3P28288 AL137843.1-201ENST00000605078 385 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.96□□□□□ -1.94
ABCD3P28288 AC090517.2-201ENST00000614966 680 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
ABCD3P28288 Z69720.2-201ENST00000624755 279 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.95□□□□□ -1.94
ABCD3P28288 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ABCD3P28288 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ABCD3P28288 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
ABCD3P28288 AC138393.1-203ENST00000327086 343 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU6-858P-201ENST00000362436 107 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU6-942P-201ENST00000363002 107 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU6-1303P-201ENST00000364841 107 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU6-38P-201ENST00000384085 107 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 MIR514A2-201ENST00000385131 88 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 MIR514A3-201ENST00000385132 88 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.95□□□□□ -1.94
ABCD3P28288 RPLP0P7-201ENST00000416050 667 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 SNRPEP10-201ENST00000420249 274 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 EIF1P1-201ENST00000421436 341 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.95□□□□□ -1.94
ABCD3P28288 RPL23AP83-201ENST00000434984 473 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 UBE2V1P8-201ENST00000437166 265 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC012308.1-201ENST00000451232 178 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 MTND3P16-201ENST00000452205 344 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU6-333P-201ENST00000459117 107 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.95□□□□□ -1.94
ABCD3P28288 MED28P2-201ENST00000475771 317 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 Y_RNA.654-201ENST00000497848 106 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 HIGD1AP13-201ENST00000509878 289 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 RNU5B-3P-201ENST00000516601 115 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 SNORA25.17-201ENST00000517184 124 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.95□□□□□ -1.94
ABCD3P28288 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ABCD3P28288 CR383656.8-201ENST00000549046 145 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.95□□□□□ -1.94
ABCD3P28288 AC024153.1-201ENST00000603103 365 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 AC008121.1-201ENST00000603244 268 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 MIR7515-201ENST00000637837 67 ntBASIC2.95□□□□□ -1.94
ABCD3P28288 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
ABCD3P28288 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
ABCD3P28288 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
ABCD3P28288 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
ABCD3P28288 OR4G1P-203ENST00000641984 1631 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ABCD3P28288 SNORA38.1-201ENST00000364172 131 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RNU6-266P-201ENST00000364225 107 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RNA5SP387-201ENST00000364226 106 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 Y_RNA.231-201ENST00000364358 102 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RNU6-1068P-201ENST00000410958 103 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 OR9R1P-201ENST00000412200 877 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.94□□□□□ -1.94
ABCD3P28288 C8orf59P1-201ENST00000429930 303 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.94□□□□□ -1.94
ABCD3P28288 AL671855.1-201ENST00000446875 1203 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RN7SL863P-201ENST00000462370 296 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RPL21P99-201ENST00000480369 423 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AC006445.1-201ENST00000491925 405 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 RNU6-189P-201ENST00000516120 101 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 COX6CP5-201ENST00000527162 228 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.94□□□□□ -1.94
ABCD3P28288 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.94□□□□□ -1.94
ABCD3P28288 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AP003465.2-201ENST00000602571 373 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AC138627.2-201ENST00000624202 601 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 AC091903.1-201ENST00000624322 454 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.94□□□□□ -1.94
ABCD3P28288 AL359854.1-201ENST00000614203 1594 ntBASIC2.94□□□□□ -1.94
ABCD3P28288 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
ABCD3P28288 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ABCD3P28288 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ABCD3P28288 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.93□□□□□ -1.94
ABCD3P28288 AL109809.4-201ENST00000603520 2185 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ABCD3P28288 RNU6-1090P-201ENST00000364065 94 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 Y_RNA.333-201ENST00000365274 102 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RNU5E-7P-201ENST00000365290 117 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RNU6-487P-201ENST00000365430 104 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RNU4-20P-201ENST00000365601 151 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RNA5SP219-201ENST00000390940 113 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 POLHP1-201ENST00000411806 470 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MICF-203ENST00000432679 129 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MTND1P4-201ENST00000435196 415 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC004383.1-201ENST00000438135 289 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RPS15AP7-201ENST00000439294 405 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.93□□□□□ -1.94
ABCD3P28288 RPL22P13-201ENST00000493291 347 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms