Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 PIGPP2-201ENST00000411569 458 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.46□□□□□ -2.18
COL5A3P25940 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC092447.3-201ENST00000426027 686 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC005534.2-201ENST00000431047 433 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 MTCYBP39-201ENST00000437562 491 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 MTCYBP3-201ENST00000445588 1137 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 PAXBP1P1-201ENST00000449315 447 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 SNRPGP6-201ENST00000451124 220 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC010099.1-201ENST00000455434 375 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL359385.1-201ENST00000456509 365 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 RPS15AP34-201ENST00000487776 387 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 MRPS17P9-201ENST00000511924 393 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 MTCYBP43-201ENST00000513621 740 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 DUXAP5-201ENST00000529668 529 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC021171.1-201ENST00000603137 706 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC027807.2-201ENST00000616099 408 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC091304.6-201ENST00000619761 202 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A3P25940 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A3P25940 SNORA4.1-201ENST00000364263 144 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 RNU5A-2P-201ENST00000384337 116 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 RNU1-148P-201ENST00000384472 162 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 TXNP7-201ENST00000406296 293 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 RNU6-920P-201ENST00000410926 92 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 RNU6-516P-201ENST00000411381 104 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 MTND1P18-201ENST00000448191 573 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 TRGVB-201ENST00000453257 471 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 BET1P1-201ENST00000482276 359 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC093677.1-201ENST00000514414 678 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.46□□□□□ -2.18
COL5A3P25940 RNU6-150P-201ENST00000516237 95 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A3P25940 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.46□□□□□ -2.18
COL5A3P25940 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.46□□□□□ -2.18
COL5A3P25940 GLYCAM1-201ENST00000546596 285 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 OR6C7P-201ENST00000547875 934 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.46□□□□□ -2.18
COL5A3P25940 PCMTD1P2-201ENST00000565017 355 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A3P25940 AC024619.4-201ENST00000580924 316 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL353997.4-201ENST00000586196 166 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL031281.1-201ENST00000604049 488 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC123912.5-201ENST00000605470 343 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL158211.4-201ENST00000606988 584 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AL355472.4-201ENST00000610233 626 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 TUSC7.1-201ENST00000610969 165 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC002550.2-201ENST00000621246 394 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 AC068880.5-201ENST00000624331 290 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 MIR4275-201ENST00000636486 87 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 TPTE2P4-201ENST00000258589 1605 ntBASIC1.46□□□□□ -2.18
COL5A3P25940 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL5A3P25940 MIR373-201ENST00000362273 69 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RNU6-777P-201ENST00000364265 104 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RNU6-278P-201ENST00000390945 109 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RNU1-139P-201ENST00000391307 165 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AF228730.1-201ENST00000397972 663 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RPS3AP24-201ENST00000407896 734 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RNU2-43P-201ENST00000410306 190 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 RNU6-193P-201ENST00000410977 107 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 MTND1P21-201ENST00000412991 285 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 CYCSP33-201ENST00000414485 327 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 MTND4P20-201ENST00000424125 869 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 BX119904.4-201ENST00000424402 301 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.45□□□□□ -2.18
COL5A3P25940 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.45□□□□□ -2.18
COL5A3P25940 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A3P25940 ATG12P2-201ENST00000456830 416 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.45□□□□□ -2.18
COL5A3P25940 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.45□□□□□ -2.18
COL5A3P25940 AC114981.1-201ENST00000503897 678 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A3P25940 HMGB3P17-201ENST00000504195 649 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A3P25940 AC011260.1-201ENST00000578420 472 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A3P25940 AC107214.2-201ENST00000608204 634 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AL445264.1-201ENST00000621719 171 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 AC103706.2-201ENST00000638080 240 ntBASIC1.45□□□□□ -2.18
COL5A3P25940 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
COL5A3P25940 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL5A3P25940 RNU1-105P-201ENST00000363470 161 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms