Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AL359385.1-201ENST00000456509 365 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 RNA5SP102-201ENST00000516865 106 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 MTND4LP18-201ENST00000526864 291 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AP003122.4-201ENST00000530980 758 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AP002453.2-201ENST00000533503 320 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC087481.2-201ENST00000565492 330 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MIR4307-201ENST00000582802 84 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MIR548AB-201ENST00000584917 84 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AP001029.3-201ENST00000588063 596 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 HMGN1P30-201ENST00000589286 268 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC121334.2-201ENST00000605387 271 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC113194.1-201ENST00000606037 500 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC006566.1-201ENST00000608943 513 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC005296.1-201ENST00000616145 209 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC073968.1-201ENST00000618594 637 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AL596245.1-201ENST00000618994 362 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC099654.12-201ENST00000639868 649 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL5A1P20908 ZNF734P-201ENST00000419494 1534 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RNU6-1249P-201ENST00000363237 111 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RNU6-114P-201ENST00000384704 105 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RNU6-821P-201ENST00000390995 107 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 U3.29-201ENST00000391296 212 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC016769.3-201ENST00000396562 315 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RNU2-8P-201ENST00000410727 190 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 TOMM22P1-201ENST00000418578 312 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RPS15AP40-201ENST00000419621 391 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 HMGN2P30-201ENST00000423237 256 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC137499.1-201ENST00000427602 88 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 PSMA2P3-201ENST00000429685 675 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.67□□□□□ -2.14
COL5A1P20908 MTND1P1-201ENST00000445453 368 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC132479.1-201ENST00000449160 144 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 MTND1P9-201ENST00000453775 944 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 Z82190.1-201ENST00000454534 490 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC090255.1-201ENST00000495779 349 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC114981.1-201ENST00000503897 678 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC087441.2-201ENST00000529141 262 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC007375.1-201ENST00000554513 578 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 MIR3682-201ENST00000581338 84 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A1P20908 AP000403.1-201ENST00000603349 851 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC025588.3-201ENST00000604182 274 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AL021997.1-201ENST00000605757 193 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC092794.1-201ENST00000612734 582 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AL158209.2-201ENST00000619266 216 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC099842.1-201ENST00000619919 596 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC002550.2-201ENST00000621246 394 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 AC099654.13-201ENST00000639774 207 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL5A1P20908 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL5A1P20908 MTND5P26-201ENST00000426018 1752 ntBASIC1.67□□□□□ -2.14
COL5A1P20908 RNU6-181P-201ENST00000363225 107 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-263P-201ENST00000363811 107 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 Y_RNA.327-201ENST00000365201 102 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-108P-201ENST00000365558 107 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 MIR181A1-201ENST00000385026 110 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A1P20908 SSXP10-201ENST00000402595 565 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-648P-201ENST00000410190 107 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-195P-201ENST00000411352 109 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 RPL21P66-201ENST00000426566 466 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 ISCA1P1-201ENST00000426679 387 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 USP9YP14-201ENST00000430663 563 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 MTND4LP10-201ENST00000435146 291 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A1P20908 PIGFP3-201ENST00000441918 722 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU1-123P-201ENST00000458950 160 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 snoU13.3-201ENST00000459441 104 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 MTND1P3-201ENST00000484956 952 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.66□□□□□ -2.14
COL5A1P20908 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 AF131216.2-201ENST00000512316 564 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-445P-201ENST00000516949 107 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AP000907.2-201ENST00000530827 353 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms