Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-430P-201ENST00000517078 107 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.65□□□□□ -1.99
PDGFRAP16234 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.65□□□□□ -1.99
PDGFRAP16234 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.65□□□□□ -1.99
PDGFRAP16234 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.65□□□□□ -1.99
PDGFRAP16234 AC012213.3-201ENST00000577199 777 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 DEFB131E-202ENST00000602581 683 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 AC068790.2-201ENST00000602601 557 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 AL138889.2-201ENST00000603883 242 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PDGFRAP16234 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 AC010297.1-201ENST00000623948 149 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 AL390237.1-201ENST00000404226 1415 ntBASIC2.65□□□□□ -1.99
PDGFRAP16234 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDGFRAP16234 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
PDGFRAP16234 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFRAP16234 MTND4P27-201ENST00000450813 1354 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 U3.12-201ENST00000364498 214 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR1-2-201ENST00000384961 85 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AL365338.1-201ENST00000422282 858 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.64□□□□□ -1.99
PDGFRAP16234 MTCO1P19-201ENST00000443487 500 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 RPS3P1-201ENST00000456781 192 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AL441985.1-201ENST00000457727 251 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC022364.2-201ENST00000457963 554 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFRAP16234 KLF3P2-201ENST00000465138 268 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC010424.1-201ENST00000506336 297 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFRAP16234 OR5AQ1P-201ENST00000527596 927 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 OR5AL2P-201ENST00000532185 920 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AC092325.1-201ENST00000566449 554 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR4775-201ENST00000581168 75 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AL670379.4-201ENST00000605279 254 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC005332.10-201ENST00000612725 619 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AC010678.1-201ENST00000614118 713 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PDGFRAP16234 AC011155.2-201ENST00000623202 216 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AL359740.1-201ENST00000624340 592 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 U6.114-201ENST00000636407 96 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 AL109809.4-201ENST00000603520 2185 ntBASIC2.64□□□□□ -1.99
PDGFRAP16234 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
PDGFRAP16234 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
PDGFRAP16234 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PDGFRAP16234 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
PDGFRAP16234 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PDGFRAP16234 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFRAP16234 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFRAP16234 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 SNORD116-1-201ENST00000384335 95 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 MIR578-201ENST00000384828 96 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.63□□□□□ -1.99
PDGFRAP16234 MTCO2P16-201ENST00000436962 677 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFRAP16234 AL360221.1-201ENST00000445989 335 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC132479.1-201ENST00000449160 144 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFRAP16234 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC133134.1-201ENST00000466800 359 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC104806.1-201ENST00000508720 308 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.63□□□□□ -1.99
PDGFRAP16234 AL391840.1-201ENST00000571144 367 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 Z84480.1-201ENST00000605131 311 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFRAP16234 AC009509.4-201ENST00000619202 509 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC009161.2-201ENST00000624626 138 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 AC090582.1-201ENST00000636321 199 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 HSPA8P4-201ENST00000511877 1920 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
PDGFRAP16234 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
PDGFRAP16234 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFRAP16234 AL359854.1-201ENST00000614203 1594 ntBASIC2.62□□□□□ -1.99
PDGFRAP16234 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PDGFRAP16234 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFRAP16234 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFRAP16234 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFRAP16234 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFRAP16234 SNORD3E-201ENST00000362899 217 ntBASIC2.62□□□□□ -1.99
PDGFRAP16234 SNORD116-2-201ENST00000384274 95 ntBASIC2.62□□□□□ -1.99
PDGFRAP16234 RNU6-456P-201ENST00000384493 107 ntBASIC2.62□□□□□ -1.99
PDGFRAP16234 SNORD116-6-201ENST00000384711 96 ntBASIC2.62□□□□□ -1.99
PDGFRAP16234 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PDGFRAP16234 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms