Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.08□□□□□ -2.42
TOP2AP11388 AC027309.3-201ENST00000623419 351 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 MIR7157-201ENST00000635801 60 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 RNU6-748P-201ENST00000384648 107 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 AC092634.6-201ENST00000418558 192 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 RPS27P16-201ENST00000425758 201 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 RPL23AP54-201ENST00000495129 419 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.08□□□□□ -2.42
TOP2AP11388 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.08□□□□□ -2.42
TOP2AP11388 AC107954.1-201ENST00000565906 727 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 AL021997.1-201ENST00000605757 193 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.08□□□□□ -2.42
TOP2AP11388 AC093913.1-201ENST00000614178 329 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 AC110491.1-201ENST00000562191 2010 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC-0.09□□□□□ -2.42
TOP2AP11388 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.09□□□□□ -2.42
TOP2AP11388 RPL37P21-201ENST00000435890 276 ntBASIC-0.09□□□□□ -2.42
TOP2AP11388 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
TOP2AP11388 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.09□□□□□ -2.42
TOP2AP11388 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.09□□□□□ -2.42
TOP2AP11388 AC069114.2-201ENST00000604699 304 ntBASIC-0.09□□□□□ -2.42
TOP2AP11388 AC080013.4-201ENST00000607624 649 ntBASIC-0.09□□□□□ -2.42
TOP2AP11388 AC008443.7-201ENST00000622195 246 ntBASIC-0.09□□□□□ -2.42
TOP2AP11388 RNA5SP361-201ENST00000362686 118 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 SNORA25-201ENST00000384384 134 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 SNORA8.3-201ENST00000384679 139 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 AL669831.1-202ENST00000428504 417 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 GTF2IP13-201ENST00000438487 386 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.1□□□□□ -2.43
TOP2AP11388 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
TOP2AP11388 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
TOP2AP11388 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
TOP2AP11388 MTND2P26-201ENST00000528255 1029 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 SNRPGP16-201ENST00000533275 226 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 MTND2P17-201ENST00000550281 688 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.1□□□□□ -2.43
TOP2AP11388 AC087481.2-201ENST00000565492 330 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.1□□□□□ -2.43
TOP2AP11388 AL360181.4-201ENST00000621752 134 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 MIR371B-201ENST00000638082 66 ntBASIC-0.1□□□□□ -2.43
TOP2AP11388 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
TOP2AP11388 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 MIR605-201ENST00000385078 83 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.11□□□□□ -2.43
TOP2AP11388 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.11□□□□□ -2.43
TOP2AP11388 AC090142.3-201ENST00000519012 385 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.11□□□□□ -2.43
TOP2AP11388 AC233702.2-202ENST00000562547 291 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 AC002400.1-201ENST00000569310 726 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 AP001180.6-201ENST00000584918 159 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 AC104465.1-201ENST00000611365 139 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.11□□□□□ -2.43
TOP2AP11388 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 SNORD114-15-201ENST00000364687 72 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.12□□□□□ -2.43
TOP2AP11388 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.12□□□□□ -2.43
TOP2AP11388 IGJP1-201ENST00000522682 475 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 AC090079.2-201ENST00000575289 768 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 MIR4493-201ENST00000584016 73 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC-0.12□□□□□ -2.43
TOP2AP11388 AC091805.2-201ENST00000603848 235 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 AL162730.1-201ENST00000605734 292 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 AC006001.4-201ENST00000622243 395 ntBASIC-0.12□□□□□ -2.43
TOP2AP11388 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
TOP2AP11388 SNORD1A-201ENST00000364968 72 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 MIR218-1-201ENST00000384999 110 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 AC114482.1-201ENST00000418010 247 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 GTF2IP20-201ENST00000431663 360 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 NRON-201ENST00000517270 370 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC-0.13□□□□□ -2.43
TOP2AP11388 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.13□□□□□ -2.43
TOP2AP11388 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
TOP2AP11388 RNU4-23P-201ENST00000362839 140 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.13□□□□□ -2.43
TOP2AP11388 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.13□□□□□ -2.43
TOP2AP11388 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.13□□□□□ -2.43
TOP2AP11388 AC012435.1-202ENST00000568772 240 ntBASIC-0.13□□□□□ -2.43
TOP2AP11388 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.13□□□□□ -2.43
TOP2AP11388 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
TOP2AP11388 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TOP2AP11388 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.14□□□□□ -2.43
TOP2AP11388 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.14□□□□□ -2.43
TOP2AP11388 RPL21P111-201ENST00000418453 477 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.14□□□□□ -2.43
TOP2AP11388 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.14□□□□□ -2.43
TOP2AP11388 AC011406.1-201ENST00000512440 370 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 IGLVI-20-201ENST00000519296 130 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.14□□□□□ -2.43
TOP2AP11388 AC091489.2-201ENST00000566263 604 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 AC240442.1-201ENST00000616055 283 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 Pinc.1-201ENST00000616452 154 ntBASIC-0.14□□□□□ -2.43
TOP2AP11388 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC-0.14□□□□□ -2.43
TOP2AP11388 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
TOP2AP11388 AC023934.1-201ENST00000574529 2389 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms