Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.94□□□□□ -2.26
FREM3P0C091 AL109620.1-201ENST00000618738 1197 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 RNU1-58P-201ENST00000362413 163 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 RNU6-778P-201ENST00000363269 103 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 SUGT1P1-201ENST00000379514 476 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 RNU11-5P-201ENST00000391216 129 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.94□□□□□ -2.26
FREM3P0C091 TPMTP2-201ENST00000414372 726 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 OR51A5P-201ENST00000415429 942 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.94□□□□□ -2.26
FREM3P0C091 AL078601.1-201ENST00000444542 271 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.94□□□□□ -2.26
FREM3P0C091 CYB5AP5-201ENST00000549779 389 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.94□□□□□ -2.26
FREM3P0C091 AL355598.1-201ENST00000604169 202 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 AC126118.1-201ENST00000607744 628 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 AC092953.2-201ENST00000608000 699 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 AL133445.2-201ENST00000611191 527 ntBASIC0.94□□□□□ -2.26
FREM3P0C091 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
FREM3P0C091 RNU6-353P-201ENST00000364266 108 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 SNORA62.1-201ENST00000364287 154 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
FREM3P0C091 RNU6-1300P-201ENST00000391046 108 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 AC244035.1-201ENST00000430042 390 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 MTND1P18-201ENST00000448191 573 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 COX6CP18-201ENST00000448769 222 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.93□□□□□ -2.26
FREM3P0C091 SNORD97-201ENST00000459187 142 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
FREM3P0C091 RNU6-113P-201ENST00000516653 101 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 AP001189.2-201ENST00000527320 189 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 AP003497.1-201ENST00000528472 562 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 SLC2A13P1-201ENST00000531560 322 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.93□□□□□ -2.26
FREM3P0C091 AC016727.2-201ENST00000603988 621 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 AC009237.15-201ENST00000610252 501 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
FREM3P0C091 AC091895.1-201ENST00000624494 256 ntBASIC0.93□□□□□ -2.26
FREM3P0C091 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
FREM3P0C091 SNORD115-3-201ENST00000363100 82 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 SNORD14B-201ENST00000364533 90 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
FREM3P0C091 RNU6-114P-201ENST00000384704 105 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 RPL21P24-201ENST00000413752 448 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC138623.1-201ENST00000418060 216 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 CR848007.2-201ENST00000424918 787 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AP001324.2-201ENST00000461163 319 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 RN7SKP265-201ENST00000516448 223 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC093249.1-201ENST00000567049 203 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC005261.5-201ENST00000596280 355 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 OR4H6P-202ENST00000603819 340 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AL050343.2-201ENST00000607338 280 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FREM3P0C091 AC091965.5-201ENST00000624785 342 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FREM3P0C091 AC092648.1-201ENST00000425870 423 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.92□□□□□ -2.26
FREM3P0C091 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.92□□□□□ -2.26
FREM3P0C091 OR6C5P-201ENST00000452388 923 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FREM3P0C091 TMEM251P1-201ENST00000503717 318 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC022861.1-201ENST00000522981 663 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC069545.1-201ENST00000605671 358 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC107075.1-201ENST00000613695 314 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC021755.4-201ENST00000616620 456 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC010975.3-201ENST00000618727 978 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AL445264.1-201ENST00000621719 171 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 AC017037.3-201ENST00000625016 472 ntBASIC0.92□□□□□ -2.26
FREM3P0C091 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.92□□□□□ -2.26
FREM3P0C091 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.92□□□□□ -2.26
FREM3P0C091 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
FREM3P0C091 RNU6-223P-201ENST00000362830 107 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 RNU6-549P-201ENST00000384433 107 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 AL590084.2-201ENST00000401481 382 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 TPMTP3-201ENST00000411928 735 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.91□□□□□ -2.26
FREM3P0C091 AC009310.1-201ENST00000414414 451 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.91□□□□□ -2.26
FREM3P0C091 EIF4EP2-201ENST00000422816 654 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 SKA2P1-201ENST00000425592 390 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 DEFB130D-201ENST00000426866 237 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.91□□□□□ -2.26
FREM3P0C091 MTCO3P45-201ENST00000443036 613 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 CYP2C59P-201ENST00000457790 269 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 AC013267.1-201ENST00000458227 267 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 CYCSP27-201ENST00000527643 293 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 MIR98-201ENST00000606724 119 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.91□□□□□ -2.26
FREM3P0C091 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FREM3P0C091 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
FREM3P0C091 AC107982.1-201ENST00000507171 1300 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 Y_RNA.374-201ENST00000365606 101 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 BTF3P8-201ENST00000414577 526 ntBASIC0.91□□□□□ -2.26
FREM3P0C091 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms