Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.18□□□□□ -1.9
MMP3P08254 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP3P08254 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP3P08254 PRPS1P1-201ENST00000445305 876 ntBASIC3.18□□□□□ -1.9
MMP3P08254 CECR9-201ENST00000453421 199 ntBASIC3.18□□□□□ -1.9
MMP3P08254 SNORD109B-201ENST00000458961 67 ntBASIC3.18□□□□□ -1.9
MMP3P08254 SNORD109A-201ENST00000459128 67 ntBASIC3.18□□□□□ -1.9
MMP3P08254 LRRC34P2-201ENST00000514850 553 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP3P08254 MIR4435-1-201ENST00000582552 80 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP3P08254 AC092747.3-201ENST00000603769 301 ntBASIC3.18□□□□□ -1.9
MMP3P08254 LARP7P1-201ENST00000605576 316 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AC009570.1-201ENST00000609599 745 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AL110115.1-201ENST00000614396 364 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AC063943.3-201ENST00000615562 356 ntBASIC3.18□□□□□ -1.9
MMP3P08254 uc_338.11-201ENST00000619132 160 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AP003122.6-201ENST00000623831 495 ntBASIC3.18□□□□□ -1.9
MMP3P08254 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
MMP3P08254 MTND1P37-201ENST00000636562 264 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AC110774.1-201ENST00000623567 2018 ntBASIC3.18□□□□□ -1.9
MMP3P08254 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
MMP3P08254 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
MMP3P08254 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
MMP3P08254 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
MMP3P08254 AL355596.1-201ENST00000565399 3996 ntBASIC3.17□□□□□ -1.9
MMP3P08254 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MMP3P08254 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
MMP3P08254 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.17□□□□□ -1.9
MMP3P08254 RNU6-1252P-201ENST00000363054 104 ntBASIC3.17□□□□□ -1.9
MMP3P08254 Y_RNA.245-201ENST00000364493 95 ntBASIC3.17□□□□□ -1.9
MMP3P08254 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MMP3P08254 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
MMP3P08254 MIR578-201ENST00000384828 96 ntBASIC3.17□□□□□ -1.9
MMP3P08254 RNA5SP219-201ENST00000390940 113 ntBASIC3.17□□□□□ -1.9
MMP3P08254 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
MMP3P08254 BX682237.1-201ENST00000415016 335 ntBASIC3.17□□□□□ -1.9
MMP3P08254 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.17□□□□□ -1.9
MMP3P08254 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.17□□□□□ -1.9
MMP3P08254 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
MMP3P08254 AL590383.1-201ENST00000428602 75 ntBASIC3.17□□□□□ -1.9
MMP3P08254 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.17□□□□□ -1.9
MMP3P08254 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.17□□□□□ -1.9
MMP3P08254 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.17□□□□□ -1.9
MMP3P08254 AL135752.1-201ENST00000479477 471 ntBASIC3.17□□□□□ -1.9
MMP3P08254 RNU6-875P-201ENST00000516488 106 ntBASIC3.17□□□□□ -1.9
MMP3P08254 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
MMP3P08254 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.17□□□□□ -1.9
MMP3P08254 SCOCP1-201ENST00000554676 349 ntBASIC3.17□□□□□ -1.9
MMP3P08254 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.17□□□□□ -1.9
MMP3P08254 AC136601.2-201ENST00000604356 474 ntBASIC3.17□□□□□ -1.9
MMP3P08254 MIR6715A-201ENST00000615929 79 ntBASIC3.17□□□□□ -1.9
MMP3P08254 AC009248.2-201ENST00000619826 254 ntBASIC3.17□□□□□ -1.9
MMP3P08254 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
MMP3P08254 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MMP3P08254 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MMP3P08254 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
MMP3P08254 AC007785.2-201ENST00000598627 1916 ntBASIC3.17□□□□□ -1.9
MMP3P08254 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MMP3P08254 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
MMP3P08254 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MMP3P08254 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MMP3P08254 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.16□□□□□ -1.9
MMP3P08254 Y_RNA.72-201ENST00000362894 103 ntBASIC3.16□□□□□ -1.9
MMP3P08254 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
MMP3P08254 Y_RNA.167-201ENST00000363735 109 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RNU6-767P-201ENST00000384132 107 ntBASIC3.16□□□□□ -1.9
MMP3P08254 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MMP3P08254 RPL21P90-201ENST00000415692 466 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RPS15AP6-201ENST00000420703 385 ntBASIC3.16□□□□□ -1.9
MMP3P08254 GPM6BP2-201ENST00000432046 144 ntBASIC3.16□□□□□ -1.9
MMP3P08254 GPM6BP1-201ENST00000446387 144 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RNU6-1208P-201ENST00000459588 107 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RPL21P41-201ENST00000459863 264 ntBASIC3.16□□□□□ -1.9
MMP3P08254 DYNLL1P5-201ENST00000467158 270 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
MMP3P08254 RPL23AP11-201ENST00000475260 469 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AL160314.1-201ENST00000490836 438 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC139453.3-201ENST00000493276 369 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC008549.1-201ENST00000512900 643 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC243972.3-201ENST00000539655 198 ntBASIC3.16□□□□□ -1.9
MMP3P08254 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.16□□□□□ -1.9
MMP3P08254 TRAV28-201ENST00000557548 323 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
MMP3P08254 UBE2V2P2-201ENST00000587677 504 ntBASIC3.16□□□□□ -1.9
MMP3P08254 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
MMP3P08254 BNIP3P25-201ENST00000596023 559 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC073539.2-201ENST00000597113 165 ntBASIC3.16□□□□□ -1.9
MMP3P08254 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AC093913.1-201ENST00000614178 329 ntBASIC3.16□□□□□ -1.9
MMP3P08254 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
MMP3P08254 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
MMP3P08254 SNORD3E-201ENST00000362899 217 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
MMP3P08254 SNORA75B-201ENST00000384053 137 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU6-393P-201ENST00000384475 107 ntBASIC3.15□□□□□ -1.91
MMP3P08254 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms