Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 AL353621.1-201ENST00000418219 243 ntBASIC3.51□□□□□ -1.85
RHOP08100 AL592045.1-201ENST00000429867 352 ntBASIC3.51□□□□□ -1.85
RHOP08100 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.51□□□□□ -1.85
RHOP08100 AL137792.2-201ENST00000443484 235 ntBASIC3.51□□□□□ -1.85
RHOP08100 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.51□□□□□ -1.85
RHOP08100 MTCO3P10-201ENST00000455912 772 ntBASIC3.51□□□□□ -1.85
RHOP08100 HMGN2P16-201ENST00000456802 261 ntBASIC3.51□□□□□ -1.85
RHOP08100 AP001486.1-201ENST00000463339 476 ntBASIC3.51□□□□□ -1.85
RHOP08100 AC104472.2-201ENST00000469035 601 ntBASIC3.51□□□□□ -1.85
RHOP08100 AL049873.1-201ENST00000480540 376 ntBASIC3.51□□□□□ -1.85
RHOP08100 RPS15AP34-201ENST00000487776 387 ntBASIC3.51□□□□□ -1.85
RHOP08100 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.51□□□□□ -1.85
RHOP08100 AC069113.1-201ENST00000517763 267 ntBASIC3.51□□□□□ -1.85
RHOP08100 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.51□□□□□ -1.85
RHOP08100 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
RHOP08100 ATP5F1P5-201ENST00000526403 760 ntBASIC3.51□□□□□ -1.85
RHOP08100 SNRPGP18-201ENST00000553000 214 ntBASIC3.51□□□□□ -1.85
RHOP08100 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
RHOP08100 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.51□□□□□ -1.85
RHOP08100 AP001836.1-201ENST00000604675 523 ntBASIC3.51□□□□□ -1.85
RHOP08100 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 RMST_4.1-201ENST00000616886 107 ntBASIC3.51□□□□□ -1.85
RHOP08100 AC068647.1-201ENST00000489539 2265 ntBASIC3.51□□□□□ -1.85
RHOP08100 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RHOP08100 NCAPGP1-201ENST00000505112 1814 ntBASIC3.51□□□□□ -1.85
RHOP08100 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.51□□□□□ -1.85
RHOP08100 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RHOP08100 MTND5P19-201ENST00000424872 1794 ntBASIC3.51□□□□□ -1.85
RHOP08100 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHOP08100 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
RHOP08100 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RHOP08100 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
RHOP08100 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
RHOP08100 RNU6-214P-201ENST00000384130 107 ntBASIC3.5□□□□□ -1.85
RHOP08100 RNU6-310P-201ENST00000384655 107 ntBASIC3.5□□□□□ -1.85
RHOP08100 RNU2-3P-201ENST00000410144 191 ntBASIC3.5□□□□□ -1.85
RHOP08100 RNU6-1304P-201ENST00000411374 106 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 Z99755.1-201ENST00000414048 380 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 RPL31P12-201ENST00000422587 358 ntBASIC3.5□□□□□ -1.85
RHOP08100 PMCHL1-202ENST00000423102 261 ntBASIC3.5□□□□□ -1.85
RHOP08100 RPL27AP8-201ENST00000424277 446 ntBASIC3.5□□□□□ -1.85
RHOP08100 AL590632.1-201ENST00000424289 371 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
RHOP08100 AL356867.1-201ENST00000429623 299 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.5□□□□□ -1.85
RHOP08100 AP003122.3-201ENST00000526316 255 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
RHOP08100 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.5□□□□□ -1.85
RHOP08100 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.5□□□□□ -1.85
RHOP08100 AC026371.1-201ENST00000551867 419 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC005476.1-201ENST00000554427 397 ntBASIC3.5□□□□□ -1.85
RHOP08100 AL157871.3-201ENST00000557231 293 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.5□□□□□ -1.85
RHOP08100 MIR1273C-201ENST00000578669 77 ntBASIC3.5□□□□□ -1.85
RHOP08100 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 AC116312.1-201ENST00000606841 314 ntBASIC3.5□□□□□ -1.85
RHOP08100 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 AC090132.2-201ENST00000615881 347 ntBASIC3.5□□□□□ -1.85
RHOP08100 ATP5A1P2-202ENST00000616464 443 ntBASIC3.5□□□□□ -1.85
RHOP08100 AL031601.2-202ENST00000622650 282 ntBASIC3.5□□□□□ -1.85
RHOP08100 SCARNA15.3-201ENST00000626315 122 ntBASIC3.5□□□□□ -1.85
RHOP08100 SCARNA4.1-201ENST00000628597 123 ntBASIC3.5□□□□□ -1.85
RHOP08100 AL512643.1-201ENST00000635735 524 ntBASIC3.5□□□□□ -1.85
RHOP08100 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHOP08100 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.5□□□□□ -1.85
RHOP08100 AP001148.1-201ENST00000624124 2359 ntBASIC3.49□□□□□ -1.85
RHOP08100 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RHOP08100 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHOP08100 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.49□□□□□ -1.85
RHOP08100 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHOP08100 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
RHOP08100 RNU6-283P-201ENST00000364788 107 ntBASIC3.49□□□□□ -1.85
RHOP08100 RNU6-395P-201ENST00000365662 106 ntBASIC3.49□□□□□ -1.85
RHOP08100 RNU6-1040P-201ENST00000383974 107 ntBASIC3.49□□□□□ -1.85
RHOP08100 UBA52P6-201ENST00000399822 382 ntBASIC3.49□□□□□ -1.85
RHOP08100 RNU4-47P-201ENST00000410876 114 ntBASIC3.49□□□□□ -1.85
RHOP08100 Y_RNA.646-201ENST00000410980 101 ntBASIC3.49□□□□□ -1.85
RHOP08100 UBE2V1P4-201ENST00000425374 344 ntBASIC3.49□□□□□ -1.85
RHOP08100 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.49□□□□□ -1.85
RHOP08100 AL645568.3-201ENST00000433683 316 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.49□□□□□ -1.85
RHOP08100 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.49□□□□□ -1.85
RHOP08100 FABP5P15-201ENST00000453566 214 ntBASIC3.49□□□□□ -1.85
RHOP08100 RPL30P15-201ENST00000457129 321 ntBASIC3.49□□□□□ -1.85
RHOP08100 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
RHOP08100 MTND3P25-201ENST00000509243 135 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC096745.1-201ENST00000509945 370 ntBASIC3.49□□□□□ -1.85
RHOP08100 AC026782.1-201ENST00000512952 449 ntBASIC3.49□□□□□ -1.85
RHOP08100 RNU6-976P-201ENST00000516086 111 ntBASIC3.49□□□□□ -1.85
RHOP08100 SNORA31.8-201ENST00000516327 108 ntBASIC3.49□□□□□ -1.85
RHOP08100 Y_RNA.708-201ENST00000516950 96 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms