Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DOAP06340 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DOAP06340 OR4G2P-202ENST00000641004 1759 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DOAP06340 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 AL021368.2-201ENST00000606125 5352 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 ZNF807-201ENST00000328088 1707 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU5A-1-201ENST00000362698 116 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU6-1059P-201ENST00000363752 98 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU6-331P-201ENST00000384724 107 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 Y_RNA.594-201ENST00000410373 140 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 AC097473.1-201ENST00000508142 408 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 AC008885.1-201ENST00000514930 301 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 SNORA31.3-201ENST00000516029 96 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU6-1016P-201ENST00000516689 94 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU6-677P-201ENST00000516914 101 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 IGKV2D-23-201ENST00000518179 286 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 RNU6-988P-201ENST00000519081 107 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 COX6CP5-201ENST00000527162 228 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 SNRPGP16-201ENST00000533275 226 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 AC022080.3-201ENST00000544433 482 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 SNORD84-203ENST00000584275 78 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DOAP06340 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 AL359547.2-201ENST00000615810 418 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 AC022418.1-201ENST00000624118 445 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 MIR622-201ENST00000638396 96 ntBASIC3.74□□□□□ -1.81
HLA-DOAP06340 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DOAP06340 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 SNORA75B-201ENST00000384053 137 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 RNU6-463P-201ENST00000384340 107 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 Y_RNA.496-201ENST00000384444 101 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 RNU6-45P-201ENST00000384471 107 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 SNORD15B-201ENST00000384714 146 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 U3.26-201ENST00000391236 204 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 RNU6-1050P-201ENST00000410388 107 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 MCFD2P1-201ENST00000417812 300 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 USP9YP7-201ENST00000436723 430 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 AL035666.1-201ENST00000446195 348 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 USP9YP32-201ENST00000452432 430 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 AL135752.1-201ENST00000479477 471 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 AC116337.1-201ENST00000509680 687 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 RNA5SP384-201ENST00000516615 116 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 AC106900.2-201ENST00000604994 317 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 ATP5A1P2-202ENST00000616464 443 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 AL132822.1-201ENST00000617063 513 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 PNPT1P2-201ENST00000456768 2050 ntBASIC3.73□□□□□ -1.81
HLA-DOAP06340 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DOAP06340 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DOAP06340 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC007496.3-201ENST00000624987 3443 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DOAP06340 MIR30E-201ENST00000362104 92 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 RNU6-371P-201ENST00000364283 108 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 Y_RNA.463-201ENST00000384271 102 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 Y_RNA.527-201ENST00000384573 102 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 MIR578-201ENST00000384828 96 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 RPL21P90-201ENST00000415692 466 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 USP9YP30-201ENST00000430729 455 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC236972.1-201ENST00000433225 199 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 SNAP23P1-201ENST00000433229 246 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DOAP06340 RPL12P25-201ENST00000455592 494 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC092436.3-201ENST00000511788 257 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 Y_RNA.661-201ENST00000516003 99 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 H3F3AP1-201ENST00000559984 334 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DOAP06340 MIR4503-201ENST00000582187 83 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 BNIP3P16-201ENST00000589779 534 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC018462.2-201ENST00000605375 395 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DOAP06340 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC091903.1-201ENST00000624322 454 ntBASIC3.72□□□□□ -1.81
HLA-DOAP06340 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DOAP06340 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DOAP06340 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms