Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.67□□□□□ -2.14
MT-ND4P03905 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.67□□□□□ -2.14
MT-ND4P03905 AC079598.5-201ENST00000547460 117 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.67□□□□□ -2.14
MT-ND4P03905 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.67□□□□□ -2.14
MT-ND4P03905 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.67□□□□□ -2.14
MT-ND4P03905 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 AC105129.3-201ENST00000605455 485 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 Y_RNA.783-201ENST00000613546 102 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 U4atac.1-201ENST00000618345 95 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.67□□□□□ -2.14
MT-ND4P03905 AL445523.1-201ENST00000451184 1362 ntBASIC1.67□□□□□ -2.14
MT-ND4P03905 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MT-ND4P03905 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.66□□□□□ -2.14
MT-ND4P03905 RNU5F-6P-201ENST00000362979 116 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 RNU6-190P-201ENST00000384154 102 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 Z98742.3-201ENST00000418637 326 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AL353689.1-201ENST00000438895 199 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND4P03905 RPL23AP3-201ENST00000453844 468 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC068587.2-201ENST00000478386 781 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 MTND2P14-201ENST00000482139 351 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC007182.2-201ENST00000489251 402 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC018437.1-201ENST00000492214 406 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC112204.1-201ENST00000502591 103 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC025678.1-201ENST00000567861 338 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 MIR4299-201ENST00000577899 72 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 MIR1273C-201ENST00000578669 77 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.66□□□□□ -2.14
MT-ND4P03905 AC008751.2-201ENST00000597885 980 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC068276.1-201ENST00000605793 379 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AP000240.1-201ENST00000609910 452 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 AC005296.1-201ENST00000616145 209 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 ZNF702P-202ENST00000434269 1966 ntBASIC1.66□□□□□ -2.14
MT-ND4P03905 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
MT-ND4P03905 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
MT-ND4P03905 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
MT-ND4P03905 MIR449A-201ENST00000362113 91 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 Y_RNA.33-201ENST00000362591 102 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 RNU6-1159P-201ENST00000362933 107 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 RNU6-501P-201ENST00000364072 100 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 SNORD115.1-201ENST00000391109 76 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 MTCYBP36-201ENST00000404146 440 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 FTH1P15-201ENST00000406984 280 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 RNU2-20P-201ENST00000410425 191 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC016831.2-201ENST00000417179 352 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL353621.1-201ENST00000418219 243 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AL365184.2-201ENST00000431139 435 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL445646.1-201ENST00000431784 216 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AL353706.1-201ENST00000436728 494 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AL606517.1-201ENST00000446914 387 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL590365.1-201ENST00000450788 243 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 RPL7P43-201ENST00000478876 753 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC140059.1-201ENST00000489238 361 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 RPL9P6-201ENST00000492764 598 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.65□□□□□ -2.15
MT-ND4P03905 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.65□□□□□ -2.15
MT-ND4P03905 RNA5SP337-201ENST00000517007 109 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AC011979.2-201ENST00000527568 352 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AP003181.2-201ENST00000528941 181 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 OR5B19P-201ENST00000531766 928 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC135279.1-201ENST00000543493 504 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 PCMTD1P2-201ENST00000565017 355 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 MIR5697-201ENST00000578045 78 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
MT-ND4P03905 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MT-ND4P03905 AC174048.1-201ENST00000603389 144 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL670379.10-201ENST00000604330 253 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AL670379.9-201ENST00000605428 253 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AL050303.3-201ENST00000613704 284 ntBASIC1.65□□□□□ -2.15
MT-ND4P03905 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND4P03905 AC008555.8-201ENST00000623602 2168 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC103710.2-202ENST00000641454 2853 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RNU6-500P-201ENST00000362349 107 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RNU4-1-201ENST00000363925 141 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RNA5SP425-201ENST00000410336 112 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RNU2-63P-201ENST00000410792 194 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND4P03905 EIF1AXP1-201ENST00000419267 435 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 DPH3P2-201ENST00000422618 250 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AC096920.1-201ENST00000423991 241 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND4P03905 RPL23AP30-201ENST00000432419 501 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 RPL7P34-201ENST00000433316 712 ntBASIC1.64□□□□□ -2.15
MT-ND4P03905 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms