Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-190P-201ENST00000384154 102 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 RNU6-606P-201ENST00000384721 111 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AL138827.1-201ENST00000402666 306 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC104389.3-201ENST00000445629 235 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MT-ND1P03886 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.44□□□□□ -2.02
MT-ND1P03886 AC022364.2-201ENST00000457963 554 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 S100A11P2-201ENST00000467589 312 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC109927.2-201ENST00000506416 303 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 MTCO3P9-201ENST00000506989 781 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC104806.1-201ENST00000508720 308 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.44□□□□□ -2.02
MT-ND1P03886 RNU1-103P-201ENST00000516502 125 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 Y_RNA.704-201ENST00000516851 102 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 RNU6-685P-201ENST00000517088 95 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.44□□□□□ -2.02
MT-ND1P03886 AC104383.1-201ENST00000530297 370 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AP003034.1-201ENST00000534621 422 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.44□□□□□ -2.02
MT-ND1P03886 AC126118.1-201ENST00000607744 628 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC073534.2-201ENST00000620377 381 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC005609.4-201ENST00000625071 447 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.44□□□□□ -2.02
MT-ND1P03886 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.44□□□□□ -2.02
MT-ND1P03886 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
MT-ND1P03886 HSPA8P4-201ENST00000511877 1920 ntBASIC2.44□□□□□ -2.02
MT-ND1P03886 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.44□□□□□ -2.02
MT-ND1P03886 AC027514.1-201ENST00000588561 1603 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND1P03886 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.43□□□□□ -2.02
MT-ND1P03886 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND1P03886 CKAP2P1-201ENST00000555477 2049 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 SNORA44-201ENST00000384584 132 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MT-ND1P03886 CISD1P1-201ENST00000393907 327 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AL356057.3-201ENST00000402607 340 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 RNA5SP21-201ENST00000410917 96 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 MTCYBP8-201ENST00000422855 651 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 MTCO3P30-201ENST00000426425 670 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.43□□□□□ -2.02
MT-ND1P03886 MTND3P21-201ENST00000433774 331 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 RPL7P54-201ENST00000438336 674 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 AC233279.1-201ENST00000455300 423 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AL356010.1-201ENST00000456364 102 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 RNU7-182P-201ENST00000459009 62 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 AC011352.1-201ENST00000512300 793 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 RN7SKP219-201ENST00000516825 296 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MT-ND1P03886 OR5BN1P-201ENST00000532955 829 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.43□□□□□ -2.02
MT-ND1P03886 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND1P03886 BNIP3P9-201ENST00000603714 553 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 AL449363.1-201ENST00000617815 186 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MT-ND1P03886 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND1P03886 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
MT-ND1P03886 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND1P03886 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND1P03886 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND1P03886 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND1P03886 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND1P03886 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND1P03886 AC006020.1-201ENST00000420179 1854 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 Y_RNA.6-201ENST00000362350 114 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 RNU6-1085P-201ENST00000363576 107 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 RNU6-1090P-201ENST00000364065 94 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 SNORA75B-201ENST00000384053 137 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 RNU6-483P-201ENST00000384088 108 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 AL590002.1-201ENST00000406554 418 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 USP9YP20-201ENST00000419224 558 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 MTCYBP5-201ENST00000423752 1135 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 RPL36AP53-201ENST00000432891 316 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 AC000111.3-201ENST00000433478 193 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 AL135938.1-201ENST00000443141 297 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 TRBV1-201ENST00000476502 284 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.42□□□□□ -2.02
MT-ND1P03886 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.42□□□□□ -2.02
MT-ND1P03886 Y_RNA.693-201ENST00000516641 110 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 SNORA31.15-201ENST00000516771 132 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 SNORD19.2-201ENST00000516978 73 ntBASIC2.42□□□□□ -2.02
MT-ND1P03886 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND1P03886 ADI1P3-201ENST00000549509 470 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms