Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NRON-201ENST00000517270 370 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 MIR5000-201ENST00000577717 103 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 MIR4714-201ENST00000580728 77 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 MIR4999-201ENST00000585029 91 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A1P02462 AC112220.3-201ENST00000605502 502 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC080013.3-201ENST00000606839 578 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AL161423.1-201ENST00000613700 262 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AP001486.3-201ENST00000615334 372 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AL078595.3-201ENST00000623815 1166 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.25□□□□□ -2.21
COL4A1P02462 CCT4P2-201ENST00000233836 1548 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 AC099786.3-201ENST00000565735 1410 ntBASIC1.25□□□□□ -2.21
COL4A1P02462 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
COL4A1P02462 MTND5P33-201ENST00000571250 1450 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 RNU4-92P-201ENST00000363783 136 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 RNU6-723P-201ENST00000383973 107 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 RNU6-1035P-201ENST00000384477 107 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 MTCO1P17-201ENST00000411522 491 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL4A1P02462 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 USP9YP26-201ENST00000421008 661 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 USP12PX-201ENST00000432383 1057 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 USP9YP24-201ENST00000434374 697 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AL049734.2-201ENST00000441066 616 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 GPM6BP3-201ENST00000442797 145 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 USP9YP17-201ENST00000444617 696 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 PTENP1-201ENST00000447117 1215 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 AC104685.1-201ENST00000502445 371 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 TPT1P8-201ENST00000510120 555 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 MTATP6P9-201ENST00000515039 680 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A1P02462 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AC090616.3-201ENST00000582184 217 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.24□□□□□ -2.21
COL4A1P02462 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.24□□□□□ -2.21
COL4A1P02462 AL096840.1-201ENST00000603287 93 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AL158042.1-201ENST00000605338 460 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A1P02462 AC009902.3-201ENST00000606235 2172 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 ICE2P2-201ENST00000483823 2787 ntBASIC1.24□□□□□ -2.21
COL4A1P02462 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.24□□□□□ -2.21
COL4A1P02462 AC092447.10-201ENST00000620607 1652 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-270P-201ENST00000364131 105 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-777P-201ENST00000364265 104 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-744P-201ENST00000365557 107 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-1316P-201ENST00000384242 108 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-140P-201ENST00000384566 108 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AL590084.2-201ENST00000401481 382 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MIR1305-201ENST00000408300 86 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A1P02462 MTCO2P8-201ENST00000412213 658 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 ZNF90P2-204ENST00000419323 1075 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC092648.1-201ENST00000425870 423 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AL591704.1-201ENST00000432574 275 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 SNRPEP7-201ENST00000438350 220 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC004854.1-201ENST00000440356 349 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MTND3P1-201ENST00000441336 220 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 GDI2P2-201ENST00000445131 608 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.23□□□□□ -2.21
COL4A1P02462 AL009048.1-201ENST00000450437 298 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MRPS17P3-201ENST00000465453 385 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A1P02462 RPS27P26-201ENST00000494583 239 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A1P02462 RPF2P2-201ENST00000504693 896 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC119751.4-201ENST00000507498 357 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AL136370.1-201ENST00000608166 691 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL4A1P02462 AP000484.1-201ENST00000620067 1252 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC099654.9-201ENST00000637055 678 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A1P02462 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
COL4A1P02462 RNA5SP62-201ENST00000363457 110 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU1-105P-201ENST00000363470 161 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU4-68P-201ENST00000364314 141 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-1200P-201ENST00000384162 107 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-83P-201ENST00000384568 112 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms