Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 RNU7-63P-201ENST00000459054 62 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-329P-201ENST00000459618 107 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC026410.2-201ENST00000460281 156 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 MRPS17P3-201ENST00000465453 385 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC090453.1-201ENST00000495560 436 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC021146.2-201ENST00000504736 556 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC114797.1-201ENST00000514003 728 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 SNORA40.12-201ENST00000516329 111 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNA5SP337-201ENST00000517007 109 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 RNU6-1314P-201ENST00000517139 104 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AP000907.2-201ENST00000530827 353 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.77□□□□□ -1.97
COL2A1P02458 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.77□□□□□ -1.97
COL2A1P02458 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 AC011468.4-201ENST00000603942 409 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC016925.2-201ENST00000605108 242 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 uc_338.5-201ENST00000611839 155 ntBASIC2.77□□□□□ -1.97
COL2A1P02458 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.77□□□□□ -1.97
COL2A1P02458 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.77□□□□□ -1.97
COL2A1P02458 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL2A1P02458 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 XIAPP3-201ENST00000312918 795 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 Y_RNA.166-201ENST00000363730 102 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 RNU6-26P-201ENST00000383985 107 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 SNORA51.6-201ENST00000384151 125 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 RNU6-39P-201ENST00000384344 107 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 RNU6-921P-201ENST00000384361 107 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 RNA5SP118-201ENST00000410385 109 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 VN1R36P-201ENST00000414936 291 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AL353777.1-201ENST00000425552 326 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 GPR143P-201ENST00000434155 205 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.76□□□□□ -1.97
COL2A1P02458 AC018634.1-201ENST00000437554 401 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 MTND3P2-201ENST00000438452 342 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 HSPE1P28-201ENST00000443139 211 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AL136380.1-201ENST00000447970 162 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 SNORD19B-201ENST00000459623 84 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 RPL7P42-201ENST00000481005 679 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AL163540.1-201ENST00000485382 386 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC005741.1-201ENST00000511094 432 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 AC087241.2-201ENST00000535801 324 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 SNRPGP18-201ENST00000553000 214 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 HSPE1P3-201ENST00000559254 309 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 SULT1C2P1-202ENST00000562418 459 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 AL356432.3-201ENST00000568952 465 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.76□□□□□ -1.97
COL2A1P02458 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 AC006504.6-201ENST00000590142 199 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC080078.3-201ENST00000605407 463 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC021646.1-201ENST00000605469 484 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.76□□□□□ -1.97
COL2A1P02458 AC040168.1-201ENST00000623594 991 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 AC134503.1-201ENST00000633048 54 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 MTND4P1-201ENST00000457501 1466 ntBASIC2.76□□□□□ -1.97
COL2A1P02458 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL2A1P02458 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL2A1P02458 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL2A1P02458 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.75□□□□□ -1.97
COL2A1P02458 AP001486.2-201ENST00000561652 5113 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.75□□□□□ -1.97
COL2A1P02458 AC066616.2-201ENST00000559334 1481 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 Y_RNA.255-201ENST00000364581 97 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 RNU6-996P-201ENST00000365438 107 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 Y_RNA.387-201ENST00000383918 102 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 Y_RNA.466-201ENST00000384294 113 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 RNU6-146P-201ENST00000384602 108 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 DSTNP4-201ENST00000399472 474 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 MTCO3P46-201ENST00000425787 232 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AL592045.1-201ENST00000429867 352 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AC236972.2-201ENST00000434979 310 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 MTCO3P2-201ENST00000457365 171 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.75□□□□□ -1.97
COL2A1P02458 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 RNU6-488P-201ENST00000515918 99 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 SNORA19.2-201ENST00000516013 114 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 RNU6-559P-201ENST00000516151 98 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 Y_RNA.682-201ENST00000516457 100 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 HMGB1P41-201ENST00000520234 440 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 OR5BN1P-201ENST00000532955 829 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AL121992.2-201ENST00000606262 256 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AC005014.2-201ENST00000607795 599 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AC019193.3-201ENST00000609144 554 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms