Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL161788.1-201ENST00000441805 169 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.07□□□□□ -2.24
COL1A1P02452 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.07□□□□□ -2.24
COL1A1P02452 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.07□□□□□ -2.24
COL1A1P02452 AC010460.2-201ENST00000509054 677 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.07□□□□□ -2.24
COL1A1P02452 DUXAP1-201ENST00000556632 463 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.07□□□□□ -2.24
COL1A1P02452 AC022254.1-201ENST00000567857 235 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.07□□□□□ -2.24
COL1A1P02452 AC005261.5-201ENST00000596280 355 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AP001429.1-201ENST00000602568 530 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 PRR13P7-201ENST00000605538 430 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.07□□□□□ -2.24
COL1A1P02452 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.07□□□□□ -2.24
COL1A1P02452 MIR330-201ENST00000362196 94 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 RNU6-955P-201ENST00000410497 104 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AC019178.2-201ENST00000423595 505 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 FAM204CP-201ENST00000424489 642 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 MTND2P5-201ENST00000432656 1006 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.06□□□□□ -2.24
COL1A1P02452 RNU7-140P-201ENST00000459546 60 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 RPS27AP10-201ENST00000496103 208 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AC091860.1-201ENST00000505723 432 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AC010468.3-201ENST00000508225 458 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 TPT1P8-201ENST00000510120 555 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 SNORA4.4-201ENST00000515921 135 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.06□□□□□ -2.24
COL1A1P02452 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.06□□□□□ -2.24
COL1A1P02452 LARP7P2-201ENST00000575306 125 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.06□□□□□ -2.24
COL1A1P02452 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.06□□□□□ -2.24
COL1A1P02452 RNU6-353P-201ENST00000364266 108 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 Y_RNA.294-201ENST00000364916 102 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
COL1A1P02452 RNU6-35P-201ENST00000384530 107 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU6-748P-201ENST00000384648 107 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU6-932P-201ENST00000391108 106 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU2-33P-201ENST00000410344 192 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RAC1P8-201ENST00000427086 527 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 SDAD1P3-201ENST00000427380 333 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.05□□□□□ -2.24
COL1A1P02452 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.05□□□□□ -2.24
COL1A1P02452 SNORA76.2-201ENST00000517095 137 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC006518.2-201ENST00000542513 940 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 AP002906.1-201ENST00000603405 233 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC016925.2-201ENST00000605108 242 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC009974.1-201ENST00000608881 455 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC024257.5-201ENST00000612739 531 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC013476.2-201ENST00000614456 459 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.05□□□□□ -2.24
COL1A1P02452 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 MIR6513-201ENST00000621188 64 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL1A1P02452 AC091925.1-201ENST00000623204 462 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AL159972.1-201ENST00000625150 448 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 MIR6086-201ENST00000638065 55 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU6-839P-201ENST00000363347 108 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU6-481P-201ENST00000384194 107 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 MIR217-201ENST00000384817 110 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 RNU4-27P-201ENST00000410889 139 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AL158050.1-201ENST00000416077 457 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 MTATP6P27-201ENST00000416987 621 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AL358176.2-201ENST00000425769 204 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 RPL7P55-201ENST00000450522 746 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.05□□□□□ -2.24
COL1A1P02452 RNA5SP57-201ENST00000459463 123 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC005410.1-202ENST00000460347 485 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.05□□□□□ -2.24
COL1A1P02452 AC091946.2-201ENST00000606105 291 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.05□□□□□ -2.24
COL1A1P02452 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 AC007490.1-201ENST00000624321 703 ntBASIC1.05□□□□□ -2.24
COL1A1P02452 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
COL1A1P02452 MIR16-2-201ENST00000362117 81 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 VTRNA1-3-201ENST00000365645 89 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 RNU6-657P-201ENST00000383904 107 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 RNU1-78P-201ENST00000391248 165 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 RNU6-575P-201ENST00000411326 105 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.04□□□□□ -2.24
COL1A1P02452 AC092634.6-201ENST00000418558 192 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 EIF4EP2-201ENST00000422816 654 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.04□□□□□ -2.24
COL1A1P02452 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.04□□□□□ -2.24
COL1A1P02452 MTCO1P53-201ENST00000441633 699 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AL022238.1-201ENST00000442557 355 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 RNU6-775P-201ENST00000459318 96 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.04□□□□□ -2.24
COL1A1P02452 RNU6-362P-201ENST00000516736 90 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AP003072.2-201ENST00000527756 676 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AC006199.1-201ENST00000548728 219 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.04□□□□□ -2.24
COL1A1P02452 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.04□□□□□ -2.24
COL1A1P02452 AC011451.2-201ENST00000604303 598 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms