Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU1-91P-201ENST00000364746 163 ntBASIC2.54□□□□□ -2
PDGFBP01127 RNU4-91P-201ENST00000364778 135 ntBASIC2.54□□□□□ -2
PDGFBP01127 RNU6-282P-201ENST00000365357 103 ntBASIC2.54□□□□□ -2
PDGFBP01127 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDGFBP01127 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.54□□□□□ -2
PDGFBP01127 Y_RNA.436-201ENST00000384097 102 ntBASIC2.54□□□□□ -2
PDGFBP01127 RNU6-14P-201ENST00000384630 106 ntBASIC2.54□□□□□ -2
PDGFBP01127 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
PDGFBP01127 BTF3P7-201ENST00000407097 488 ntBASIC2.54□□□□□ -2
PDGFBP01127 RNU6-248P-201ENST00000410720 107 ntBASIC2.54□□□□□ -2
PDGFBP01127 MORF4L1P6-201ENST00000418771 268 ntBASIC2.54□□□□□ -2
PDGFBP01127 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
PDGFBP01127 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.54□□□□□ -2
PDGFBP01127 AL441985.1-201ENST00000457727 251 ntBASIC2.54□□□□□ -2
PDGFBP01127 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.54□□□□□ -2
PDGFBP01127 RNU7-26P-201ENST00000458980 63 ntBASIC2.54□□□□□ -2
PDGFBP01127 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.54□□□□□ -2
PDGFBP01127 RPL39P36-201ENST00000490784 156 ntBASIC2.54□□□□□ -2
PDGFBP01127 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
PDGFBP01127 AC079140.3-201ENST00000511111 550 ntBASIC2.54□□□□□ -2
PDGFBP01127 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.54□□□□□ -2
PDGFBP01127 AP003392.2-201ENST00000527269 208 ntBASIC2.54□□□□□ -2
PDGFBP01127 OR5BN1P-201ENST00000532955 829 ntBASIC2.54□□□□□ -2
PDGFBP01127 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 BNIP3P9-201ENST00000603714 553 ntBASIC2.54□□□□□ -2
PDGFBP01127 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
PDGFBP01127 AL121992.2-201ENST00000606262 256 ntBASIC2.54□□□□□ -2
PDGFBP01127 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PDGFBP01127 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.54□□□□□ -2
PDGFBP01127 AL020991.1-201ENST00000612314 373 ntBASIC2.54□□□□□ -2
PDGFBP01127 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.54□□□□□ -2
PDGFBP01127 AC009090.3-201ENST00000616553 565 ntBASIC2.54□□□□□ -2
PDGFBP01127 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PDGFBP01127 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFBP01127 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.54□□□□□ -2
PDGFBP01127 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PDGFBP01127 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
PDGFBP01127 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PDGFBP01127 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDGFBP01127 RNU4-40P-201ENST00000364351 143 ntBASIC2.53□□□□□ -2
PDGFBP01127 RNU4-75P-201ENST00000364621 146 ntBASIC2.53□□□□□ -2
PDGFBP01127 RNU6-169P-201ENST00000365336 107 ntBASIC2.53□□□□□ -2
PDGFBP01127 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PDGFBP01127 RNU6-456P-201ENST00000384493 107 ntBASIC2.53□□□□□ -2
PDGFBP01127 MTCO3P30-201ENST00000426425 670 ntBASIC2.53□□□□□ -2
PDGFBP01127 AL591212.2-201ENST00000433923 257 ntBASIC2.53□□□□□ -2
PDGFBP01127 AL353706.1-201ENST00000436728 494 ntBASIC2.53□□□□□ -2
PDGFBP01127 RPS29P6-201ENST00000438196 145 ntBASIC2.53□□□□□ -2
PDGFBP01127 AL161651.1-201ENST00000440882 223 ntBASIC2.53□□□□□ -2
PDGFBP01127 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.53□□□□□ -2
PDGFBP01127 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
PDGFBP01127 MTCYBP1-201ENST00000454315 1119 ntBASIC2.53□□□□□ -2
PDGFBP01127 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PDGFBP01127 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.53□□□□□ -2
PDGFBP01127 RN7SKP43-201ENST00000516173 320 ntBASIC2.53□□□□□ -2
PDGFBP01127 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
PDGFBP01127 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.53□□□□□ -2
PDGFBP01127 OR5B19P-201ENST00000531766 928 ntBASIC2.53□□□□□ -2
PDGFBP01127 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.53□□□□□ -2
PDGFBP01127 AC098848.2-201ENST00000588023 330 ntBASIC2.53□□□□□ -2
PDGFBP01127 AP002360.4-201ENST00000606980 481 ntBASIC2.53□□□□□ -2
PDGFBP01127 AL512643.1-201ENST00000635735 524 ntBASIC2.53□□□□□ -2
PDGFBP01127 Z99571.1-201ENST00000636677 394 ntBASIC2.53□□□□□ -2
PDGFBP01127 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PDGFBP01127 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFBP01127 MTND4P35-201ENST00000604257 1375 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFBP01127 AL356292.1-201ENST00000283110 373 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 RNU6-19P-201ENST00000384718 107 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 MIR301A-201ENST00000385261 86 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 MIR147B-201ENST00000390185 80 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 MIR1287-201ENST00000408492 90 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 RNA5SP111-201ENST00000411386 101 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 RPS12P24-201ENST00000412619 387 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 PTGES3P4-201ENST00000426243 356 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.52□□□□□ -2.01
PDGFBP01127 RPS24P1-201ENST00000438550 371 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AC011816.1-201ENST00000441346 546 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 BRK1P2-201ENST00000442875 223 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFBP01127 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AC090096.1-201ENST00000489168 390 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFBP01127 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.52□□□□□ -2.01
PDGFBP01127 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.52□□□□□ -2.01
PDGFBP01127 RNU6-430P-201ENST00000517078 107 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.52□□□□□ -2.01
PDGFBP01127 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.52□□□□□ -2.01
PDGFBP01127 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFBP01127 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFBP01127 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
PDGFBP01127 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms