Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL159153.1-201ENST00000619688 317 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 MIR7154-201ENST00000620673 73 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AC130454.1-201ENST00000622948 401 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.8□□□□□ -1.8
CNOT4O95628 AL691447.3-201ENST00000635020 330 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CNOT4O95628 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CNOT4O95628 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CNOT4O95628 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CNOT4O95628 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 MIR383-201ENST00000362257 73 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 RNU1-14P-201ENST00000362759 152 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 Y_RNA.117-201ENST00000363294 101 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 Y_RNA.518-201ENST00000384552 113 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 Y_RNA.533-201ENST00000384596 114 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 MTCO3P19-201ENST00000415864 321 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.79□□□□□ -1.8
CNOT4O95628 RPL23AP52-201ENST00000439311 478 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 MTND4LP30-201ENST00000454092 297 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC087588.1-201ENST00000462203 316 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 RPL35AP15-201ENST00000468042 339 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC022493.1-201ENST00000492984 337 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CNOT4O95628 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 RNU6-143P-201ENST00000516942 93 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 RNU6-897P-201ENST00000517135 105 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC023632.4-201ENST00000517783 191 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 TRAV8-5-201ENST00000537369 341 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AL157871.3-201ENST00000557231 293 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.79□□□□□ -1.8
CNOT4O95628 MIR1273C-201ENST00000578669 77 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
CNOT4O95628 AC006130.2-201ENST00000586202 326 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.79□□□□□ -1.8
CNOT4O95628 RPS29P30-201ENST00000600975 111 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AC107294.1-201ENST00000609524 467 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.79□□□□□ -1.8
CNOT4O95628 AC027309.3-201ENST00000623419 351 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.79□□□□□ -1.8
CNOT4O95628 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CNOT4O95628 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.79□□□□□ -1.8
CNOT4O95628 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 MTND5P6-201ENST00000422338 1798 ntBASIC3.79□□□□□ -1.8
CNOT4O95628 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNOT4O95628 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNOT4O95628 RNU6-395P-201ENST00000365662 106 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.78□□□□□ -1.8
CNOT4O95628 RNU6-1062P-201ENST00000383908 107 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 MIR628-201ENST00000385229 95 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 MIR301A-201ENST00000385261 86 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 RNU6-1093P-201ENST00000391194 107 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.78□□□□□ -1.8
CNOT4O95628 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 RN7SKP202-201ENST00000410439 330 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.78□□□□□ -1.8
CNOT4O95628 AC139712.2-201ENST00000424302 339 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.78□□□□□ -1.8
CNOT4O95628 AC092423.1-201ENST00000430165 186 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.78□□□□□ -1.8
CNOT4O95628 RNU6-1037P-201ENST00000459571 107 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC133134.1-201ENST00000466800 359 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 RNA5SP49-201ENST00000516450 115 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 SNORD59.2-201ENST00000516873 68 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 RNA5SP471-201ENST00000516971 106 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.78□□□□□ -1.8
CNOT4O95628 AC109329.1-201ENST00000518744 317 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.78□□□□□ -1.8
CNOT4O95628 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CNOT4O95628 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.78□□□□□ -1.8
CNOT4O95628 AL160290.3-201ENST00000604869 165 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 SNORA51-201ENST00000606420 132 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AC090132.2-201ENST00000615881 347 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 AL138721.1-201ENST00000616756 179 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 SDR42E1P4-201ENST00000620894 481 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 ZNF299P-201ENST00000406845 1804 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
CNOT4O95628 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
CNOT4O95628 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
CNOT4O95628 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
CNOT4O95628 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNOT4O95628 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNOT4O95628 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNOT4O95628 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNOT4O95628 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
CNOT4O95628 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNOT4O95628 RNU6-512P-201ENST00000364438 103 ntBASIC3.77□□□□□ -1.81
CNOT4O95628 RNU6-1317P-201ENST00000364582 104 ntBASIC3.77□□□□□ -1.81
CNOT4O95628 SNORA62.3-201ENST00000365110 153 ntBASIC3.77□□□□□ -1.81
CNOT4O95628 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms