Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CYP2C61P-201ENST00000604072 290 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AP005229.2-201ENST00000609980 697 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL512506.2-201ENST00000624472 458 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.71□□□□□ -2.3
ABCA1O95477 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 Y_RNA.303-201ENST00000364998 94 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 MIR518A2-201ENST00000384966 87 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 RNA5SP212-201ENST00000391223 107 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL109755.1-201ENST00000401791 649 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL133264.1-201ENST00000407157 562 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL449283.1-202ENST00000418249 604 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC007919.1-201ENST00000429380 217 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 FABP5P14-201ENST00000437273 393 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC118469.1-201ENST00000442943 488 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 VN1R10P-201ENST00000447106 875 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ABCA1O95477 AL160236.1-201ENST00000556317 195 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AC090079.2-201ENST00000575289 768 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AP000403.1-201ENST00000603349 851 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL161722.3-201ENST00000605789 2983 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL031775.1-201ENST00000607014 887 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 AL133445.2-201ENST00000611191 527 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 MTND1P37-201ENST00000636562 264 ntBASIC0.71□□□□□ -2.3
ABCA1O95477 Y_RNA.471-201ENST00000384312 102 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 SNORA40C-201ENST00000391285 128 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 OR9R1P-201ENST00000412200 877 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA1O95477 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA1O95477 HSPE1P21-201ENST00000438283 308 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA1O95477 RPL30P6-201ENST00000475925 342 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 AC107032.1-201ENST00000485945 480 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.7□□□□□ -2.3
ABCA1O95477 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA1O95477 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
ABCA1O95477 AC009032.1-201ENST00000617574 431 ntBASIC0.7□□□□□ -2.3
ABCA1O95477 Y_RNA.255-201ENST00000364581 97 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
ABCA1O95477 HMGN2P39-201ENST00000398005 273 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.69□□□□□ -2.3
ABCA1O95477 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.69□□□□□ -2.3
ABCA1O95477 JTBP1-201ENST00000441314 247 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 OFD1P3Y-201ENST00000453312 783 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA1O95477 AC098862.1-201ENST00000504991 413 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.69□□□□□ -2.3
ABCA1O95477 AC012414.6-201ENST00000568241 401 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC004805.2-201ENST00000605382 482 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 DUSP12P1-201ENST00000612874 516 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC003001.2-201ENST00000616294 831 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.69□□□□□ -2.3
ABCA1O95477 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
ABCA1O95477 USP9YP26-201ENST00000421008 661 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC244636.1-201ENST00000421152 228 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 PPP1R11P2-201ENST00000423543 382 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AL049874.1-201ENST00000489560 388 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AK3P2-201ENST00000507976 429 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 RNA5SP290-201ENST00000517133 127 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA1O95477 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA1O95477 ROCK1P1-201ENST00000573767 549 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 AC010133.1-201ENST00000615809 842 ntBASIC0.69□□□□□ -2.3
ABCA1O95477 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 SNORA25.8-201ENST00000364831 128 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC092634.6-201ENST00000418558 192 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 MTCO3P1-205ENST00000422088 832 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.68□□□□□ -2.3
ABCA1O95477 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 CYB5AP5-201ENST00000549779 389 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 AC009974.1-201ENST00000608881 455 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AL078604.3-201ENST00000615580 211 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 RNU6-611P-201ENST00000384276 104 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 RNU6-35P-201ENST00000384530 107 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 RNU2-7P-201ENST00000410794 178 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC097463.2-201ENST00000421074 142 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA1O95477 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 AL353706.1-201ENST00000436728 494 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 RNA5SP395-201ENST00000516567 118 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 RN7SKP258-201ENST00000517151 304 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA1O95477 AP001429.1-201ENST00000602568 530 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC239868.4-201ENST00000608318 671 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 MIR8074-201ENST00000615081 81 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AL596245.1-201ENST00000618994 362 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AC007490.1-201ENST00000624321 703 ntBASIC0.68□□□□□ -2.3
ABCA1O95477 AL138713.1-201ENST00000624026 2130 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms